Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC7.27□□□□□ -1.25
Rfx1P48377 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC7.27□□□□□ -1.25
Rfx1P48377 Igkv4-77-201ENSMUST00000199410 352 ntBASIC7.27□□□□□ -1.25
Rfx1P48377 Gm45226-201ENSMUST00000206602 288 ntBASIC7.27□□□□□ -1.25
Rfx1P48377 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Rfx1P48377 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC7.27□□□□□ -1.25
Rfx1P48377 Gm24490-201ENSMUST00000083803 98 ntBASIC7.27□□□□□ -1.25
Rfx1P48377 Gm10205-201ENSMUST00000087431 234 ntBASIC7.27□□□□□ -1.25
Rfx1P48377 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC7.27□□□□□ -1.25
Rfx1P48377 Gm45632-201ENSMUST00000211532 1888 ntBASIC7.27□□□□□ -1.25
Rfx1P48377 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC7.27□□□□□ -1.25
Rfx1P48377 Gm37101-201ENSMUST00000191656 3660 ntBASIC7.27□□□□□ -1.25
Rfx1P48377 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Rfx1P48377 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Rfx1P48377 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC7.27□□□□□ -1.25
Rfx1P48377 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Rfx1P48377 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Rfx1P48377 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Rfx1P48377 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC7.27□□□□□ -1.25
Rfx1P48377 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC7.27□□□□□ -1.25
Rfx1P48377 Gm42721-201ENSMUST00000197165 1523 ntBASIC7.27□□□□□ -1.25
Rfx1P48377 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Rfx1P48377 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Rfx1P48377 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC7.26□□□□□ -1.25
Rfx1P48377 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm45413-201ENSMUST00000210389 3538 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Rfx1P48377 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm13854-201ENSMUST00000121183 1679 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Rfx1P48377 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Rfx1P48377 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm6125-201ENSMUST00000217983 3472 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Rfx1P48377 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 Gm12399-201ENSMUST00000121475 446 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC7.26□□□□□ -1.25
Rfx1P48377 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm25244-201ENSMUST00000178089 132 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm29111-201ENSMUST00000188823 696 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 Gm28584-201ENSMUST00000191489 696 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 Gm38138-201ENSMUST00000193274 696 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 Gm43048-201ENSMUST00000196101 388 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 Gm4332-201ENSMUST00000196114 346 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 Ighv1-73-201ENSMUST00000197435 352 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 Gm43578-201ENSMUST00000201250 459 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 Gm42963-201ENSMUST00000202943 1217 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Rfx1P48377 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC7.26□□□□□ -1.25
Rfx1P48377 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC7.26□□□□□ -1.25
Rfx1P48377 AC164295.1-201ENSMUST00000224861 186 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 AC154640.3-201ENSMUST00000227492 846 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 AC154283.1-201ENSMUST00000228417 389 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 Gm24695-201ENSMUST00000083877 83 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm37217-201ENSMUST00000194017 3521 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC7.26□□□□□ -1.25
Rfx1P48377 Gm43330-201ENSMUST00000199706 2153 ntBASIC7.26□□□□□ -1.25
Rfx1P48377 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Rfx1P48377 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
Rfx1P48377 AC158779.2-201ENSMUST00000227902 1947 ntBASIC7.25□□□□□ -1.25
Rfx1P48377 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Rfx1P48377 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Rfx1P48377 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Rfx1P48377 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
Rfx1P48377 Gm22771-201ENSMUST00000104449 91 ntBASIC7.25□□□□□ -1.25
Rfx1P48377 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Rfx1P48377 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Rfx1P48377 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Rfx1P48377 Gm15312-201ENSMUST00000118827 271 ntBASIC7.25□□□□□ -1.25
Rfx1P48377 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC7.25□□□□□ -1.25
Rfx1P48377 Gm13339-201ENSMUST00000120651 510 ntBASIC7.25□□□□□ -1.25
Rfx1P48377 Gm13593-201ENSMUST00000121329 692 ntBASIC7.25□□□□□ -1.25
Rfx1P48377 Gm15309-201ENSMUST00000121644 240 ntBASIC7.25□□□□□ -1.25
Rfx1P48377 Gm26173-201ENSMUST00000158416 136 ntBASIC7.25□□□□□ -1.25
Rfx1P48377 Gm26211-201ENSMUST00000158578 129 ntBASIC7.25□□□□□ -1.25
Rfx1P48377 Gm8715-201ENSMUST00000162728 531 ntBASIC7.25□□□□□ -1.25
Rfx1P48377 Gm20453-201ENSMUST00000173968 226 ntBASIC7.25□□□□□ -1.25
Rfx1P48377 Gm26925-201ENSMUST00000182470 957 ntBASIC7.25□□□□□ -1.25
Rfx1P48377 Gm27186-201ENSMUST00000184223 307 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms