Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm28780-201ENSMUST00000190223 615 ntBASIC4.72□□□□□ -1.65
Tnfsf4P43488 Gm28969-211ENSMUST00000190992 615 ntBASIC4.72□□□□□ -1.65
Tnfsf4P43488 Gm28990-207ENSMUST00000191219 615 ntBASIC4.72□□□□□ -1.65
Tnfsf4P43488 Gm36468-201ENSMUST00000192119 615 ntBASIC4.72□□□□□ -1.65
Tnfsf4P43488 Gm34176-201ENSMUST00000192621 474 ntBASIC4.72□□□□□ -1.65
Tnfsf4P43488 Gm31572-201ENSMUST00000193341 615 ntBASIC4.72□□□□□ -1.65
Tnfsf4P43488 Gm30175-201ENSMUST00000194173 615 ntBASIC4.72□□□□□ -1.65
Tnfsf4P43488 Gm30858-201ENSMUST00000195516 615 ntBASIC4.72□□□□□ -1.65
Tnfsf4P43488 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Tnfsf4P43488 Gm44485-201ENSMUST00000199569 137 ntBASIC4.72□□□□□ -1.65
Tnfsf4P43488 Gm43554-201ENSMUST00000199987 186 ntBASIC4.72□□□□□ -1.65
Tnfsf4P43488 Gm42643-201ENSMUST00000200504 279 ntBASIC4.72□□□□□ -1.65
Tnfsf4P43488 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Tnfsf4P43488 Gm32453-201ENSMUST00000204183 456 ntBASIC4.72□□□□□ -1.65
Tnfsf4P43488 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC4.72□□□□□ -1.65
Tnfsf4P43488 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.72□□□□□ -1.65
Tnfsf4P43488 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.72□□□□□ -1.65
Tnfsf4P43488 AC173482.3-201ENSMUST00000225492 1212 ntBASIC4.72□□□□□ -1.65
Tnfsf4P43488 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
Tnfsf4P43488 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Tnfsf4P43488 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.72□□□□□ -1.65
Tnfsf4P43488 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Tnfsf4P43488 Gm9386-201ENSMUST00000095195 381 ntBASIC4.72□□□□□ -1.65
Tnfsf4P43488 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Tnfsf4P43488 CT009734.1-201ENSMUST00000227657 1687 ntBASIC4.72□□□□□ -1.65
Tnfsf4P43488 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Tnfsf4P43488 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Tnfsf4P43488 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Tnfsf4P43488 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Tnfsf4P43488 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Tnfsf4P43488 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Tnfsf4P43488 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Tnfsf4P43488 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
Tnfsf4P43488 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Tnfsf4P43488 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.71□□□□□ -1.65
Tnfsf4P43488 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Tnfsf4P43488 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Tnfsf4P43488 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Tnfsf4P43488 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Tnfsf4P43488 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Tnfsf4P43488 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Tnfsf4P43488 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC4.71□□□□□ -1.66
Tnfsf4P43488 Gm16259-201ENSMUST00000145241 553 ntBASIC4.71□□□□□ -1.66
Tnfsf4P43488 Gm11507-201ENSMUST00000156462 412 ntBASIC4.71□□□□□ -1.66
Tnfsf4P43488 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC4.71□□□□□ -1.66
Tnfsf4P43488 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Tnfsf4P43488 Gm26607-201ENSMUST00000180661 867 ntBASIC4.71□□□□□ -1.66
Tnfsf4P43488 Gm2497-201ENSMUST00000189539 601 ntBASIC4.71□□□□□ -1.66
Tnfsf4P43488 Ighv6-2-201ENSMUST00000192430 295 ntBASIC4.71□□□□□ -1.66
Tnfsf4P43488 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC4.71□□□□□ -1.66
Tnfsf4P43488 Gm43596-201ENSMUST00000202818 884 ntBASIC4.71□□□□□ -1.66
Tnfsf4P43488 Gm18215-201ENSMUST00000204429 798 ntBASIC4.71□□□□□ -1.66
Tnfsf4P43488 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC4.71□□□□□ -1.66
Tnfsf4P43488 AC153840.1-201ENSMUST00000219685 313 ntBASIC4.71□□□□□ -1.66
Tnfsf4P43488 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Tnfsf4P43488 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Tnfsf4P43488 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Tnfsf4P43488 Gm24706-201ENSMUST00000082806 137 ntBASIC4.71□□□□□ -1.66
Tnfsf4P43488 Gm22155-201ENSMUST00000083836 162 ntBASIC4.71□□□□□ -1.66
Tnfsf4P43488 Gm25682-201ENSMUST00000083942 164 ntBASIC4.71□□□□□ -1.66
Tnfsf4P43488 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Tnfsf4P43488 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Tnfsf4P43488 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.71□□□□□ -1.66
Tnfsf4P43488 Gm19176-201ENSMUST00000222149 1831 ntBASIC4.71□□□□□ -1.66
Tnfsf4P43488 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.71□□□□□ -1.66
Tnfsf4P43488 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
Tnfsf4P43488 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Tnfsf4P43488 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Tnfsf4P43488 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Tnfsf4P43488 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Tnfsf4P43488 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.7□□□□□ -1.66
Tnfsf4P43488 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.7□□□□□ -1.66
Tnfsf4P43488 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.7□□□□□ -1.66
Tnfsf4P43488 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Tnfsf4P43488 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Tnfsf4P43488 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Tnfsf4P43488 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.7□□□□□ -1.66
Tnfsf4P43488 Gm11790-201ENSMUST00000119569 455 ntBASIC4.7□□□□□ -1.66
Tnfsf4P43488 Gm22958-201ENSMUST00000122512 184 ntBASIC4.7□□□□□ -1.66
Tnfsf4P43488 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC4.7□□□□□ -1.66
Tnfsf4P43488 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Tnfsf4P43488 Gm3076-201ENSMUST00000161613 451 ntBASIC4.7□□□□□ -1.66
Tnfsf4P43488 Gm5777-201ENSMUST00000177265 448 ntBASIC4.7□□□□□ -1.66
Tnfsf4P43488 Mir7687-201ENSMUST00000184722 59 ntBASIC4.7□□□□□ -1.66
Tnfsf4P43488 Gm28957-201ENSMUST00000190174 373 ntBASIC4.7□□□□□ -1.66
Tnfsf4P43488 Gm5842-201ENSMUST00000195073 622 ntBASIC4.7□□□□□ -1.66
Tnfsf4P43488 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Tnfsf4P43488 Gm19617-201ENSMUST00000202977 308 ntBASIC4.7□□□□□ -1.66
Tnfsf4P43488 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC4.7□□□□□ -1.66
Tnfsf4P43488 Gm46192-201ENSMUST00000217894 326 ntBASIC4.7□□□□□ -1.66
Tnfsf4P43488 Gm19195-201ENSMUST00000222018 511 ntBASIC4.7□□□□□ -1.66
Tnfsf4P43488 AC157572.4-201ENSMUST00000228203 549 ntBASIC4.7□□□□□ -1.66
Tnfsf4P43488 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Tnfsf4P43488 Mir218-2-201ENSMUST00000083649 110 ntBASIC4.7□□□□□ -1.66
Tnfsf4P43488 Mir7-2-201ENSMUST00000083675 97 ntBASIC4.7□□□□□ -1.66
Tnfsf4P43488 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Tnfsf4P43488 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
Tnfsf4P43488 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Tnfsf4P43488 Gm42440-201ENSMUST00000197906 2284 ntBASIC4.7□□□□□ -1.66
Tnfsf4P43488 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms