Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HttP42859 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HttP42859 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.09□□□□□ -1.59
HttP42859 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HttP42859 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HttP42859 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.09□□□□□ -1.59
HttP42859 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HttP42859 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HttP42859 Gm44434-201ENSMUST00000203918 3745 ntBASIC5.09□□□□□ -1.59
HttP42859 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HttP42859 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HttP42859 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.09□□□□□ -1.59
HttP42859 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
HttP42859 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
HttP42859 Gm27165-201ENSMUST00000183951 232 ntBASIC5.09□□□□□ -1.59
HttP42859 Gm38234-201ENSMUST00000195204 421 ntBASIC5.09□□□□□ -1.59
HttP42859 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HttP42859 Gm44003-201ENSMUST00000203024 490 ntBASIC5.09□□□□□ -1.59
HttP42859 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.09□□□□□ -1.59
HttP42859 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC5.09□□□□□ -1.6
HttP42859 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.09□□□□□ -1.6
HttP42859 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.09□□□□□ -1.6
HttP42859 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HttP42859 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HttP42859 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HttP42859 Gm37925-201ENSMUST00000195352 4255 ntBASIC5.08□□□□□ -1.6
HttP42859 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HttP42859 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HttP42859 Gm23577-201ENSMUST00000103950 110 ntBASIC5.08□□□□□ -1.6
HttP42859 Gm15988-201ENSMUST00000118677 367 ntBASIC5.08□□□□□ -1.6
HttP42859 Gm22120-201ENSMUST00000175590 70 ntBASIC5.08□□□□□ -1.6
HttP42859 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HttP42859 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HttP42859 Gm38201-201ENSMUST00000192143 387 ntBASIC5.08□□□□□ -1.6
HttP42859 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.08□□□□□ -1.6
HttP42859 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HttP42859 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC5.08□□□□□ -1.6
HttP42859 AC129202.3-201ENSMUST00000224413 733 ntBASIC5.08□□□□□ -1.6
HttP42859 AC122448.1-201ENSMUST00000226317 772 ntBASIC5.08□□□□□ -1.6
HttP42859 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HttP42859 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HttP42859 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HttP42859 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HttP42859 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HttP42859 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
HttP42859 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HttP42859 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.08□□□□□ -1.6
HttP42859 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
HttP42859 Gm4487-201ENSMUST00000150617 442 ntBASIC5.08□□□□□ -1.6
HttP42859 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC5.08□□□□□ -1.6
HttP42859 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.08□□□□□ -1.6
HttP42859 Gm43304-201ENSMUST00000196803 326 ntBASIC5.08□□□□□ -1.6
HttP42859 Gm45171-201ENSMUST00000206360 736 ntBASIC5.08□□□□□ -1.6
HttP42859 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.08□□□□□ -1.6
HttP42859 Gm10145-201ENSMUST00000077776 462 ntBASIC5.08□□□□□ -1.6
HttP42859 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HttP42859 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HttP42859 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HttP42859 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HttP42859 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HttP42859 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HttP42859 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HttP42859 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC5.08□□□□□ -1.6
HttP42859 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.08□□□□□ -1.6
HttP42859 Gm14500-201ENSMUST00000121647 113 ntBASIC5.08□□□□□ -1.6
HttP42859 Gm23959-201ENSMUST00000157208 324 ntBASIC5.08□□□□□ -1.6
HttP42859 Gm19921-201ENSMUST00000210505 703 ntBASIC5.08□□□□□ -1.6
HttP42859 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.08□□□□□ -1.6
HttP42859 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HttP42859 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.08□□□□□ -1.6
HttP42859 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HttP42859 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
HttP42859 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HttP42859 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HttP42859 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC5.07□□□□□ -1.6
HttP42859 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HttP42859 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HttP42859 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HttP42859 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HttP42859 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HttP42859 Gm21638-201ENSMUST00000179473 836 ntBASIC5.07□□□□□ -1.6
HttP42859 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HttP42859 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.07□□□□□ -1.6
HttP42859 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HttP42859 Gm7034-201ENSMUST00000218638 645 ntBASIC5.07□□□□□ -1.6
HttP42859 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HttP42859 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HttP42859 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HttP42859 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
HttP42859 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HttP42859 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HttP42859 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HttP42859 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC5.07□□□□□ -1.6
HttP42859 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HttP42859 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC5.07□□□□□ -1.6
HttP42859 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HttP42859 Gm44294-201ENSMUST00000205090 728 ntBASIC5.07□□□□□ -1.6
HttP42859 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HttP42859 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HttP42859 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms