Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Sox6P40645 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Sox6P40645 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Sox6P40645 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Sox6P40645 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Sox6P40645 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Sox6P40645 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC4.79□□□□□ -1.64
Sox6P40645 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Sox6P40645 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Sox6P40645 Ighv1-27-201ENSMUST00000194473 340 ntBASIC4.79□□□□□ -1.64
Sox6P40645 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Sox6P40645 Gm42694-201ENSMUST00000196951 358 ntBASIC4.79□□□□□ -1.64
Sox6P40645 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sox6P40645 Gm43974-201ENSMUST00000205080 684 ntBASIC4.79□□□□□ -1.64
Sox6P40645 Gm7688-201ENSMUST00000212857 337 ntBASIC4.79□□□□□ -1.64
Sox6P40645 AC134439.1-201ENSMUST00000220923 600 ntBASIC4.79□□□□□ -1.64
Sox6P40645 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.79□□□□□ -1.64
Sox6P40645 Gm24207-201ENSMUST00000082781 108 ntBASIC4.79□□□□□ -1.64
Sox6P40645 Olfr878-201ENSMUST00000086061 1065 ntBASIC4.79□□□□□ -1.64
Sox6P40645 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sox6P40645 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Sox6P40645 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Sox6P40645 Gm5715-201ENSMUST00000196854 1465 ntBASIC4.79□□□□□ -1.64
Sox6P40645 Smc5-206ENSMUST00000226111 3265 ntBASIC4.79□□□□□ -1.64
Sox6P40645 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sox6P40645 Gm43428-201ENSMUST00000200108 3845 ntBASIC4.79□□□□□ -1.64
Sox6P40645 Gm37607-201ENSMUST00000194925 2623 ntBASIC4.78□□□□□ -1.64
Sox6P40645 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.78□□□□□ -1.64
Sox6P40645 AC154640.4-201ENSMUST00000226647 4640 ntBASIC4.78□□□□□ -1.64
Sox6P40645 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sox6P40645 Gm44248-201ENSMUST00000203079 1549 ntBASIC4.78□□□□□ -1.64
Sox6P40645 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.78□□□□□ -1.64
Sox6P40645 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.78□□□□□ -1.64
Sox6P40645 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Sox6P40645 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sox6P40645 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Sox6P40645 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Sox6P40645 Gm9429-201ENSMUST00000117804 868 ntBASIC4.78□□□□□ -1.64
Sox6P40645 Gm15803-201ENSMUST00000120118 394 ntBASIC4.78□□□□□ -1.64
Sox6P40645 Gm11825-201ENSMUST00000120710 736 ntBASIC4.78□□□□□ -1.64
Sox6P40645 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC4.78□□□□□ -1.64
Sox6P40645 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sox6P40645 Scarna13-201ENSMUST00000158164 275 ntBASIC4.78□□□□□ -1.64
Sox6P40645 Gm6047-201ENSMUST00000167221 574 ntBASIC4.78□□□□□ -1.64
Sox6P40645 Gm2959-201ENSMUST00000169844 621 ntBASIC4.78□□□□□ -1.64
Sox6P40645 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.78□□□□□ -1.64
Sox6P40645 Gm27541-201ENSMUST00000184078 122 ntBASIC4.78□□□□□ -1.64
Sox6P40645 Gm27985-201ENSMUST00000185112 378 ntBASIC4.78□□□□□ -1.64
Sox6P40645 Gm36994-201ENSMUST00000192941 492 ntBASIC4.78□□□□□ -1.64
Sox6P40645 Gm37445-201ENSMUST00000195318 242 ntBASIC4.78□□□□□ -1.64
Sox6P40645 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sox6P40645 Gm42579-201ENSMUST00000200512 734 ntBASIC4.78□□□□□ -1.64
Sox6P40645 Gm43036-201ENSMUST00000200594 373 ntBASIC4.78□□□□□ -1.64
Sox6P40645 Gm18997-201ENSMUST00000216353 822 ntBASIC4.78□□□□□ -1.64
Sox6P40645 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC4.78□□□□□ -1.64
Sox6P40645 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sox6P40645 CT485612.3-201ENSMUST00000222179 408 ntBASIC4.78□□□□□ -1.64
Sox6P40645 AC174797.2-203ENSMUST00000224017 716 ntBASIC4.78□□□□□ -1.64
Sox6P40645 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.78□□□□□ -1.64
Sox6P40645 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sox6P40645 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Sox6P40645 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Sox6P40645 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sox6P40645 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sox6P40645 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Sox6P40645 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sox6P40645 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sox6P40645 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sox6P40645 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sox6P40645 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sox6P40645 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.77□□□□□ -1.65
Sox6P40645 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sox6P40645 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sox6P40645 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Sox6P40645 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sox6P40645 Gm11975-201ENSMUST00000118772 481 ntBASIC4.77□□□□□ -1.65
Sox6P40645 Gm14603-201ENSMUST00000121275 448 ntBASIC4.77□□□□□ -1.65
Sox6P40645 Gm12332-201ENSMUST00000121397 922 ntBASIC4.77□□□□□ -1.65
Sox6P40645 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.77□□□□□ -1.65
Sox6P40645 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC4.77□□□□□ -1.65
Sox6P40645 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC4.77□□□□□ -1.65
Sox6P40645 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC4.77□□□□□ -1.65
Sox6P40645 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sox6P40645 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC4.77□□□□□ -1.65
Sox6P40645 Gm22923-201ENSMUST00000174952 110 ntBASIC4.77□□□□□ -1.65
Sox6P40645 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sox6P40645 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Sox6P40645 Gm21139-201ENSMUST00000186594 877 ntBASIC4.77□□□□□ -1.65
Sox6P40645 Gm42983-201ENSMUST00000199879 815 ntBASIC4.77□□□□□ -1.65
Sox6P40645 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC4.77□□□□□ -1.65
Sox6P40645 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Sox6P40645 Gm44820-201ENSMUST00000207420 396 ntBASIC4.77□□□□□ -1.65
Sox6P40645 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC4.77□□□□□ -1.65
Sox6P40645 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sox6P40645 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC4.77□□□□□ -1.65
Sox6P40645 AC113031.3-201ENSMUST00000226552 190 ntBASIC4.77□□□□□ -1.65
Sox6P40645 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Sox6P40645 AC154846.2-201ENSMUST00000228805 424 ntBASIC4.77□□□□□ -1.65
Sox6P40645 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sox6P40645 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms