Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col18a1P39061 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col18a1P39061 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
Col18a1P39061 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col18a1P39061 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Col18a1P39061 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC7.18□□□□□ -1.26
Col18a1P39061 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Col18a1P39061 Gm11407-201ENSMUST00000120362 1058 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Gm14800-201ENSMUST00000122084 1272 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Gm24382-201ENSMUST00000122698 107 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC7.18□□□□□ -1.26
Col18a1P39061 Gm15501-202ENSMUST00000140687 625 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC7.18□□□□□ -1.26
Col18a1P39061 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC7.18□□□□□ -1.26
Col18a1P39061 Gm24186-201ENSMUST00000157983 127 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Gm16114-201ENSMUST00000161930 300 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Col18a1P39061 Gm28685-201ENSMUST00000187545 1101 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Gm37000-201ENSMUST00000193058 428 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Gm8861-201ENSMUST00000196346 832 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Gm8891-201ENSMUST00000198546 832 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC7.18□□□□□ -1.26
Col18a1P39061 AC111046.1-201ENSMUST00000217715 412 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Col18a1P39061 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC7.18□□□□□ -1.26
Col18a1P39061 AC163621.2-201ENSMUST00000222229 682 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 CT573086.3-201ENSMUST00000228762 594 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Col18a1P39061 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Col18a1P39061 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Col18a1P39061 Ube2nl-201ENSMUST00000085228 456 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Gm10997-201ENSMUST00000210294 1500 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Col18a1P39061 Gm44660-201ENSMUST00000207134 2465 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 AC120347.2-201ENSMUST00000222224 2015 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col18a1P39061 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Col18a1P39061 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
Col18a1P39061 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC7.18□□□□□ -1.26
Col18a1P39061 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col18a1P39061 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col18a1P39061 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col18a1P39061 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col18a1P39061 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col18a1P39061 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col18a1P39061 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col18a1P39061 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col18a1P39061 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col18a1P39061 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col18a1P39061 Gm45477-201ENSMUST00000200213 5498 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col18a1P39061 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col18a1P39061 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col18a1P39061 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col18a1P39061 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC7.18□□□□□ -1.26
Col18a1P39061 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Col18a1P39061 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Col18a1P39061 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col18a1P39061 Gm11406-201ENSMUST00000117418 484 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Gm13469-201ENSMUST00000118231 350 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Gm14046-201ENSMUST00000119389 509 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Gm12094-201ENSMUST00000121781 472 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC7.18□□□□□ -1.26
Col18a1P39061 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col18a1P39061 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC7.18□□□□□ -1.26
Col18a1P39061 Gm37272-201ENSMUST00000193401 488 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Gm18611-201ENSMUST00000200334 1118 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC7.18□□□□□ -1.26
Col18a1P39061 AC123067.1-201ENSMUST00000217711 462 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC7.18□□□□□ -1.26
Col18a1P39061 AC125399.1-201ENSMUST00000224236 595 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 AC137117.1-201ENSMUST00000226912 441 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Col18a1P39061 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col18a1P39061 Gm42843-201ENSMUST00000196328 3616 ntBASIC7.18□□□□□ -1.26
Col18a1P39061 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col18a1P39061 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col18a1P39061 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col18a1P39061 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Col18a1P39061 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col18a1P39061 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC7.17□□□□□ -1.26
Col18a1P39061 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC7.17□□□□□ -1.26
Col18a1P39061 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col18a1P39061 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Col18a1P39061 Gm13359-201ENSMUST00000119000 695 ntBASIC7.17□□□□□ -1.26
Col18a1P39061 Gm14998-201ENSMUST00000120502 495 ntBASIC7.17□□□□□ -1.26
Col18a1P39061 Gm14463-201ENSMUST00000121117 498 ntBASIC7.17□□□□□ -1.26
Col18a1P39061 Gm37884-201ENSMUST00000191857 818 ntBASIC7.17□□□□□ -1.26
Col18a1P39061 AC136146.1-201ENSMUST00000196180 91 ntBASIC7.17□□□□□ -1.26
Col18a1P39061 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC7.17□□□□□ -1.26
Col18a1P39061 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC7.17□□□□□ -1.26
Col18a1P39061 Gm45910-201ENSMUST00000212493 1003 ntBASIC7.17□□□□□ -1.26
Col18a1P39061 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC7.17□□□□□ -1.26
Col18a1P39061 AC158803.3-201ENSMUST00000220024 211 ntBASIC7.17□□□□□ -1.26
Col18a1P39061 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC7.17□□□□□ -1.26
Col18a1P39061 CT009600.2-201ENSMUST00000226638 481 ntBASIC7.17□□□□□ -1.26
Col18a1P39061 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col18a1P39061 Gm5215-201ENSMUST00000054380 405 ntBASIC7.17□□□□□ -1.26
Col18a1P39061 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Col18a1P39061 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms