Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col2a1P28481 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC5.69□□□□□ -1.5
Col2a1P28481 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.69□□□□□ -1.5
Col2a1P28481 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC5.69□□□□□ -1.5
Col2a1P28481 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.69□□□□□ -1.5
Col2a1P28481 Gm7045-201ENSMUST00000221466 605 ntBASIC5.69□□□□□ -1.5
Col2a1P28481 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Col2a1P28481 Gm24031-201ENSMUST00000083930 131 ntBASIC5.69□□□□□ -1.5
Col2a1P28481 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.69□□□□□ -1.5
Col2a1P28481 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col2a1P28481 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.69□□□□□ -1.5
Col2a1P28481 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Col2a1P28481 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col2a1P28481 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.68□□□□□ -1.5
Col2a1P28481 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col2a1P28481 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
Col2a1P28481 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col2a1P28481 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
Col2a1P28481 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC5.68□□□□□ -1.5
Col2a1P28481 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col2a1P28481 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.68□□□□□ -1.5
Col2a1P28481 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col2a1P28481 Gm24469-201ENSMUST00000104487 131 ntBASIC5.68□□□□□ -1.5
Col2a1P28481 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Col2a1P28481 Gm12039-201ENSMUST00000118219 180 ntBASIC5.68□□□□□ -1.5
Col2a1P28481 Gm12820-201ENSMUST00000119233 342 ntBASIC5.68□□□□□ -1.5
Col2a1P28481 Gm13815-201ENSMUST00000119963 412 ntBASIC5.68□□□□□ -1.5
Col2a1P28481 Gm13867-201ENSMUST00000120844 395 ntBASIC5.68□□□□□ -1.5
Col2a1P28481 Rab26os-201ENSMUST00000176215 477 ntBASIC5.68□□□□□ -1.5
Col2a1P28481 Mir6899-201ENSMUST00000184798 64 ntBASIC5.68□□□□□ -1.5
Col2a1P28481 Gm29664-201ENSMUST00000191125 463 ntBASIC5.68□□□□□ -1.5
Col2a1P28481 Gm18426-201ENSMUST00000191874 973 ntBASIC5.68□□□□□ -1.5
Col2a1P28481 Gm2622-201ENSMUST00000200018 471 ntBASIC5.68□□□□□ -1.5
Col2a1P28481 Gm42643-201ENSMUST00000200504 279 ntBASIC5.68□□□□□ -1.5
Col2a1P28481 Gm44138-201ENSMUST00000204939 271 ntBASIC5.68□□□□□ -1.5
Col2a1P28481 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.68□□□□□ -1.5
Col2a1P28481 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col2a1P28481 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col2a1P28481 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.68□□□□□ -1.5
Col2a1P28481 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col2a1P28481 Gm45697-201ENSMUST00000212893 2876 ntBASIC5.68□□□□□ -1.5
Col2a1P28481 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Col2a1P28481 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col2a1P28481 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col2a1P28481 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col2a1P28481 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.68□□□□□ -1.5
Col2a1P28481 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col2a1P28481 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col2a1P28481 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.67□□□□□ -1.5
Col2a1P28481 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.67□□□□□ -1.5
Col2a1P28481 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.67□□□□□ -1.5
Col2a1P28481 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col2a1P28481 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Col2a1P28481 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col2a1P28481 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col2a1P28481 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col2a1P28481 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col2a1P28481 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.67□□□□□ -1.5
Col2a1P28481 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Col2a1P28481 Gm14881-201ENSMUST00000120366 372 ntBASIC5.67□□□□□ -1.5
Col2a1P28481 Gm13932-201ENSMUST00000120873 610 ntBASIC5.67□□□□□ -1.5
Col2a1P28481 Gm23318-201ENSMUST00000158000 108 ntBASIC5.67□□□□□ -1.5
Col2a1P28481 Gm22940-201ENSMUST00000158560 155 ntBASIC5.67□□□□□ -1.5
Col2a1P28481 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Col2a1P28481 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC5.67□□□□□ -1.5
Col2a1P28481 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.67□□□□□ -1.5
Col2a1P28481 Gm43144-201ENSMUST00000198256 485 ntBASIC5.67□□□□□ -1.5
Col2a1P28481 Gm44757-201ENSMUST00000206373 157 ntBASIC5.67□□□□□ -1.5
Col2a1P28481 Gm4290-201ENSMUST00000206897 814 ntBASIC5.67□□□□□ -1.5
Col2a1P28481 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.67□□□□□ -1.5
Col2a1P28481 Gm45610-201ENSMUST00000209227 784 ntBASIC5.67□□□□□ -1.5
Col2a1P28481 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col2a1P28481 Gm6863-201ENSMUST00000052882 636 ntBASIC5.67□□□□□ -1.5
Col2a1P28481 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col2a1P28481 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col2a1P28481 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col2a1P28481 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.67□□□□□ -1.5
Col2a1P28481 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
Col2a1P28481 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col2a1P28481 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.67□□□□□ -1.5
Col2a1P28481 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.67□□□□□ -1.5
Col2a1P28481 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col2a1P28481 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col2a1P28481 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col2a1P28481 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col2a1P28481 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col2a1P28481 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col2a1P28481 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
Col2a1P28481 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col2a1P28481 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col2a1P28481 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.66□□□□□ -1.5
Col2a1P28481 Gm14706-201ENSMUST00000117744 255 ntBASIC5.66□□□□□ -1.5
Col2a1P28481 Gm14909-201ENSMUST00000117853 351 ntBASIC5.66□□□□□ -1.5
Col2a1P28481 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col2a1P28481 Gm24113-201ENSMUST00000157477 276 ntBASIC5.66□□□□□ -1.5
Col2a1P28481 Gm25846-201ENSMUST00000158013 135 ntBASIC5.66□□□□□ -1.5
Col2a1P28481 Gm16589-201ENSMUST00000159522 918 ntBASIC5.66□□□□□ -1.5
Col2a1P28481 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col2a1P28481 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col2a1P28481 Gm9569-201ENSMUST00000187492 787 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms