Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 AC117797.1-201ENSMUST00000223977 695 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 AC123534.1-201ENSMUST00000224060 656 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 AC159205.4-201ENSMUST00000225964 704 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 AC167013.4-201ENSMUST00000226712 317 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm26330-201ENSMUST00000082817 104 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 Gm22971-201ENSMUST00000083305 97 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Sdc1P18828 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Sdc1P18828 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Sdc1P18828 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm11885-201ENSMUST00000118473 1428 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Sdc1P18828 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Sdc1P18828 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Sdc1P18828 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Sdc1P18828 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Sdc1P18828 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Sdc1P18828 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Sdc1P18828 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Sdc1P18828 Gm14385-201ENSMUST00000116315 876 ntBASIC4.11□□□□□ -1.75
Sdc1P18828 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Sdc1P18828 Gm13013-201ENSMUST00000119087 523 ntBASIC4.11□□□□□ -1.75
Sdc1P18828 Gm16463-201ENSMUST00000120527 721 ntBASIC4.11□□□□□ -1.75
Sdc1P18828 Gm22601-201ENSMUST00000157595 250 ntBASIC4.11□□□□□ -1.75
Sdc1P18828 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Sdc1P18828 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Sdc1P18828 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC4.11□□□□□ -1.75
Sdc1P18828 Gm20690-201ENSMUST00000177341 315 ntBASIC4.11□□□□□ -1.75
Sdc1P18828 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Sdc1P18828 Gm28116-201ENSMUST00000189064 387 ntBASIC4.11□□□□□ -1.75
Sdc1P18828 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC4.11□□□□□ -1.75
Sdc1P18828 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC4.11□□□□□ -1.75
Sdc1P18828 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.11□□□□□ -1.75
Sdc1P18828 Gm37490-201ENSMUST00000195566 724 ntBASIC4.11□□□□□ -1.75
Sdc1P18828 Gm42753-201ENSMUST00000196718 1268 ntBASIC4.11□□□□□ -1.75
Sdc1P18828 Mir409-201ENSMUST00000198153 79 ntBASIC4.11□□□□□ -1.75
Sdc1P18828 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC4.11□□□□□ -1.75
Sdc1P18828 Gm17834-201ENSMUST00000204322 891 ntBASIC4.11□□□□□ -1.75
Sdc1P18828 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC4.11□□□□□ -1.75
Sdc1P18828 Gm19201-201ENSMUST00000210127 778 ntBASIC4.11□□□□□ -1.75
Sdc1P18828 Gm5055-201ENSMUST00000215697 581 ntBASIC4.11□□□□□ -1.75
Sdc1P18828 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.11□□□□□ -1.75
Sdc1P18828 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.11□□□□□ -1.75
Sdc1P18828 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.11□□□□□ -1.75
Sdc1P18828 AC154510.1-201ENSMUST00000223925 737 ntBASIC4.11□□□□□ -1.75
Sdc1P18828 AC125019.1-201ENSMUST00000224809 908 ntBASIC4.11□□□□□ -1.75
Sdc1P18828 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Sdc1P18828 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Sdc1P18828 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Sdc1P18828 Gm25260-201ENSMUST00000083053 134 ntBASIC4.11□□□□□ -1.75
Sdc1P18828 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Sdc1P18828 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Sdc1P18828 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Sdc1P18828 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Sdc1P18828 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Sdc1P18828 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.11□□□□□ -1.75
Sdc1P18828 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Sdc1P18828 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC4.11□□□□□ -1.75
Sdc1P18828 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Sdc1P18828 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Sdc1P18828 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Sdc1P18828 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Sdc1P18828 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Sdc1P18828 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Sdc1P18828 Gm23193-201ENSMUST00000102427 82 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Gm25396-201ENSMUST00000103981 133 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Gm24869-201ENSMUST00000104072 128 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Snora35-201ENSMUST00000104579 128 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC4.1□□□□□ -1.75
Sdc1P18828 Gm12261-201ENSMUST00000117499 645 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Gm14116-201ENSMUST00000117733 805 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Gm14909-201ENSMUST00000117853 351 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Gm14018-201ENSMUST00000119042 455 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Gm11445-201ENSMUST00000119101 532 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Gm23837-201ENSMUST00000122656 286 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Sdc1P18828 Gm23958-201ENSMUST00000157207 105 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Gm25989-201ENSMUST00000158761 133 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Gm16134-201ENSMUST00000161714 336 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Sdc1P18828 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Dlx6os1-204ENSMUST00000184182 146 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Gm27185-201ENSMUST00000184296 247 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Sdc1P18828 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.1□□□□□ -1.75
Sdc1P18828 Gm29281-201ENSMUST00000188077 381 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Gm18348-201ENSMUST00000191227 820 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Gm37934-201ENSMUST00000192902 402 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Gm18702-201ENSMUST00000196923 588 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC4.1□□□□□ -1.75
Sdc1P18828 Gm44879-201ENSMUST00000207007 503 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Olfr1309-201ENSMUST00000207885 964 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms