Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.87□□□□□ -1.47
Col1a1P11087 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col1a1P11087 Gm45697-201ENSMUST00000212893 2876 ntBASIC5.87□□□□□ -1.47
Col1a1P11087 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.87□□□□□ -1.47
Col1a1P11087 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Col1a1P11087 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
Col1a1P11087 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Col1a1P11087 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col1a1P11087 Gm14628-201ENSMUST00000117508 635 ntBASIC5.87□□□□□ -1.47
Col1a1P11087 Gm15206-201ENSMUST00000119143 454 ntBASIC5.87□□□□□ -1.47
Col1a1P11087 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col1a1P11087 Gm13220-201ENSMUST00000121535 508 ntBASIC5.87□□□□□ -1.47
Col1a1P11087 Gm22343-201ENSMUST00000122648 286 ntBASIC5.87□□□□□ -1.47
Col1a1P11087 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Col1a1P11087 Gm6155-201ENSMUST00000173735 341 ntBASIC5.87□□□□□ -1.47
Col1a1P11087 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col1a1P11087 Gm18802-201ENSMUST00000186270 888 ntBASIC5.87□□□□□ -1.47
Col1a1P11087 Gm28859-201ENSMUST00000186650 616 ntBASIC5.87□□□□□ -1.47
Col1a1P11087 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.87□□□□□ -1.47
Col1a1P11087 Gm18181-201ENSMUST00000190670 736 ntBASIC5.87□□□□□ -1.47
Col1a1P11087 Gm6546-201ENSMUST00000192096 766 ntBASIC5.87□□□□□ -1.47
Col1a1P11087 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC5.87□□□□□ -1.47
Col1a1P11087 Gm43441-201ENSMUST00000201458 205 ntBASIC5.87□□□□□ -1.47
Col1a1P11087 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col1a1P11087 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.87□□□□□ -1.47
Col1a1P11087 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.87□□□□□ -1.47
Col1a1P11087 AC146601.1-201ENSMUST00000227910 905 ntBASIC5.87□□□□□ -1.47
Col1a1P11087 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col1a1P11087 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.87□□□□□ -1.47
Col1a1P11087 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col1a1P11087 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC5.87□□□□□ -1.47
Col1a1P11087 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col1a1P11087 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.87□□□□□ -1.47
Col1a1P11087 Gm7269-201ENSMUST00000210819 1373 ntBASIC5.87□□□□□ -1.47
Col1a1P11087 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.87□□□□□ -1.47
Col1a1P11087 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col1a1P11087 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col1a1P11087 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
Col1a1P11087 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col1a1P11087 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col1a1P11087 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col1a1P11087 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col1a1P11087 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col1a1P11087 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Col1a1P11087 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col1a1P11087 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col1a1P11087 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col1a1P11087 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col1a1P11087 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
Col1a1P11087 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col1a1P11087 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC5.86□□□□□ -1.47
Col1a1P11087 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.86□□□□□ -1.47
Col1a1P11087 Gm14985-201ENSMUST00000118693 786 ntBASIC5.86□□□□□ -1.47
Col1a1P11087 Gm14688-201ENSMUST00000119169 303 ntBASIC5.86□□□□□ -1.47
Col1a1P11087 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC5.86□□□□□ -1.47
Col1a1P11087 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col1a1P11087 Gm15796-201ENSMUST00000162135 204 ntBASIC5.86□□□□□ -1.47
Col1a1P11087 Gm20614-201ENSMUST00000177106 632 ntBASIC5.86□□□□□ -1.47
Col1a1P11087 Gm38011-201ENSMUST00000193312 279 ntBASIC5.86□□□□□ -1.47
Col1a1P11087 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.86□□□□□ -1.47
Col1a1P11087 Gm20940-201ENSMUST00000197308 360 ntBASIC5.86□□□□□ -1.47
Col1a1P11087 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col1a1P11087 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col1a1P11087 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col1a1P11087 Snora52-201ENSMUST00000082732 137 ntBASIC5.86□□□□□ -1.47
Col1a1P11087 Gm24031-201ENSMUST00000083930 131 ntBASIC5.86□□□□□ -1.47
Col1a1P11087 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col1a1P11087 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col1a1P11087 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col1a1P11087 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col1a1P11087 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC5.86□□□□□ -1.47
Col1a1P11087 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.86□□□□□ -1.47
Col1a1P11087 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col1a1P11087 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col1a1P11087 AC168056.3-201ENSMUST00000225395 2540 ntBASIC5.86□□□□□ -1.47
Col1a1P11087 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col1a1P11087 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.86□□□□□ -1.47
Col1a1P11087 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col1a1P11087 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col1a1P11087 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.86□□□□□ -1.47
Col1a1P11087 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col1a1P11087 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col1a1P11087 Gm43961-201ENSMUST00000203289 1872 ntBASIC5.85□□□□□ -1.47
Col1a1P11087 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.85□□□□□ -1.47
Col1a1P11087 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Col1a1P11087 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.85□□□□□ -1.47
Col1a1P11087 Gm13250-201ENSMUST00000117209 753 ntBASIC5.85□□□□□ -1.47
Col1a1P11087 Gm14909-201ENSMUST00000117853 351 ntBASIC5.85□□□□□ -1.47
Col1a1P11087 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.85□□□□□ -1.47
Col1a1P11087 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Col1a1P11087 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.85□□□□□ -1.47
Col1a1P11087 Mir7022-201ENSMUST00000183749 61 ntBASIC5.85□□□□□ -1.47
Col1a1P11087 Gm5244-202ENSMUST00000189517 743 ntBASIC5.85□□□□□ -1.47
Col1a1P11087 Gm29138-201ENSMUST00000191444 348 ntBASIC5.85□□□□□ -1.47
Col1a1P11087 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col1a1P11087 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.85□□□□□ -1.47
Col1a1P11087 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.85□□□□□ -1.47
Col1a1P11087 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Col1a1P11087 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col1a1P11087 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms