Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.35□□□□□ -1.55
TnfP06804 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TnfP06804 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.35□□□□□ -1.55
TnfP06804 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.35□□□□□ -1.55
TnfP06804 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TnfP06804 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TnfP06804 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
TnfP06804 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.34□□□□□ -1.55
TnfP06804 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TnfP06804 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
TnfP06804 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.34□□□□□ -1.55
TnfP06804 Gm37332-201ENSMUST00000195853 2844 ntBASIC5.34□□□□□ -1.55
TnfP06804 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
TnfP06804 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
TnfP06804 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
TnfP06804 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TnfP06804 Gm25595-201ENSMUST00000102273 97 ntBASIC5.34□□□□□ -1.55
TnfP06804 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TnfP06804 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
TnfP06804 Gm11366-201ENSMUST00000119279 429 ntBASIC5.34□□□□□ -1.55
TnfP06804 Gm14563-201ENSMUST00000120571 354 ntBASIC5.34□□□□□ -1.55
TnfP06804 Gm13149-201ENSMUST00000122071 339 ntBASIC5.34□□□□□ -1.55
TnfP06804 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.34□□□□□ -1.55
TnfP06804 Gm16060-201ENSMUST00000153140 478 ntBASIC5.34□□□□□ -1.55
TnfP06804 Gm23673-201ENSMUST00000157474 298 ntBASIC5.34□□□□□ -1.55
TnfP06804 Gm23162-201ENSMUST00000175081 121 ntBASIC5.34□□□□□ -1.55
TnfP06804 Gm28385-201ENSMUST00000185671 292 ntBASIC5.34□□□□□ -1.55
TnfP06804 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.34□□□□□ -1.55
TnfP06804 Gm43524-201ENSMUST00000197278 298 ntBASIC5.34□□□□□ -1.55
TnfP06804 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC5.34□□□□□ -1.55
TnfP06804 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.34□□□□□ -1.55
TnfP06804 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC5.34□□□□□ -1.55
TnfP06804 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC5.34□□□□□ -1.55
TnfP06804 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.34□□□□□ -1.55
TnfP06804 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
TnfP06804 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.34□□□□□ -1.55
TnfP06804 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.34□□□□□ -1.55
TnfP06804 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.34□□□□□ -1.55
TnfP06804 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TnfP06804 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TnfP06804 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TnfP06804 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
TnfP06804 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TnfP06804 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
TnfP06804 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TnfP06804 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TnfP06804 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TnfP06804 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.34□□□□□ -1.56
TnfP06804 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.34□□□□□ -1.56
TnfP06804 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
TnfP06804 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.34□□□□□ -1.56
TnfP06804 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
TnfP06804 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.56
TnfP06804 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.34□□□□□ -1.56
TnfP06804 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.34□□□□□ -1.56
TnfP06804 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
TnfP06804 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.33□□□□□ -1.56
TnfP06804 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
TnfP06804 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TnfP06804 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.33□□□□□ -1.56
TnfP06804 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TnfP06804 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TnfP06804 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
TnfP06804 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TnfP06804 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TnfP06804 Gm26312-201ENSMUST00000157769 165 ntBASIC5.33□□□□□ -1.56
TnfP06804 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC5.33□□□□□ -1.56
TnfP06804 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TnfP06804 Gm5777-201ENSMUST00000177265 448 ntBASIC5.33□□□□□ -1.56
TnfP06804 Gm2147-201ENSMUST00000193588 639 ntBASIC5.33□□□□□ -1.56
TnfP06804 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.33□□□□□ -1.56
TnfP06804 Gm8999-201ENSMUST00000204951 969 ntBASIC5.33□□□□□ -1.56
TnfP06804 Gm3816-201ENSMUST00000209803 433 ntBASIC5.33□□□□□ -1.56
TnfP06804 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC5.33□□□□□ -1.56
TnfP06804 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.33□□□□□ -1.56
TnfP06804 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.33□□□□□ -1.56
TnfP06804 CT009754.4-201ENSMUST00000221430 565 ntBASIC5.33□□□□□ -1.56
TnfP06804 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC5.33□□□□□ -1.56
TnfP06804 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TnfP06804 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TnfP06804 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TnfP06804 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TnfP06804 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TnfP06804 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.33□□□□□ -1.56
TnfP06804 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TnfP06804 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TnfP06804 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TnfP06804 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TnfP06804 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.32□□□□□ -1.56
TnfP06804 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TnfP06804 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TnfP06804 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.32□□□□□ -1.56
TnfP06804 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.32□□□□□ -1.56
TnfP06804 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TnfP06804 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TnfP06804 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TnfP06804 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TnfP06804 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.32□□□□□ -1.56
TnfP06804 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.32□□□□□ -1.56
TnfP06804 Gm11196-201ENSMUST00000119052 395 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 124.4 ms