Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm25535-201ENSMUST00000175364 125 ntBASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Gm8296-201ENSMUST00000185597 524 ntBASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Gm25667-201ENSMUST00000157701 275 ntBASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Gm18505-201ENSMUST00000187360 790 ntBASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 AC160865.1-201ENSMUST00000219873 151 ntBASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Gm24224-201ENSMUST00000158828 258 ntBASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 AL772397.1-201ENSMUST00000216707 606 ntBASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Gm10237-201ENSMUST00000078393 273 ntBASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Mir338-201ENSMUST00000083666 98 ntBASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Abca17-201ENSMUST00000039324 5202 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Gm45762-201ENSMUST00000212863 2619 ntBASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 AC113031.7-201ENSMUST00000228609 1928 ntBASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Gm23485-201ENSMUST00000104181 155 ntBASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Gm38040-201ENSMUST00000193505 225 ntBASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Gm8137-201ENSMUST00000218997 463 ntBASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Gm37925-201ENSMUST00000195352 4255 ntBASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Spag9-205ENSMUST00000103168 6840 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 AC121870.1-201ENSMUST00000216279 4879 ntBASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Gm7380-201ENSMUST00000211599 466 ntBASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 AC158633.1-201ENSMUST00000219892 649 ntBASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col6a3E9PWQ3 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Nrxn3-205ENSMUST00000163134 7922 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm13338-201ENSMUST00000120235 361 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms