Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.18□□□□□ -1.58
Scn1aA2APX8 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC5.18□□□□□ -1.58
Scn1aA2APX8 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1aA2APX8 CT954323.2-201ENSMUST00000222056 213 ntBASIC5.18□□□□□ -1.58
Scn1aA2APX8 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Scn1aA2APX8 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
Scn1aA2APX8 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scn1aA2APX8 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Scn1aA2APX8 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.17□□□□□ -1.58
Scn1aA2APX8 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.17□□□□□ -1.58
Scn1aA2APX8 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Scn1aA2APX8 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Scn1aA2APX8 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.17□□□□□ -1.58
Scn1aA2APX8 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Scn1aA2APX8 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scn1aA2APX8 Gm13149-201ENSMUST00000122071 339 ntBASIC5.17□□□□□ -1.58
Scn1aA2APX8 Gm18802-201ENSMUST00000186270 888 ntBASIC5.17□□□□□ -1.58
Scn1aA2APX8 Gm37070-201ENSMUST00000193272 460 ntBASIC5.17□□□□□ -1.58
Scn1aA2APX8 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Scn1aA2APX8 Gm42452-201ENSMUST00000199749 617 ntBASIC5.17□□□□□ -1.58
Scn1aA2APX8 Gm44952-201ENSMUST00000204443 433 ntBASIC5.17□□□□□ -1.58
Scn1aA2APX8 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Scn1aA2APX8 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.17□□□□□ -1.58
Scn1aA2APX8 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scn1aA2APX8 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Scn1aA2APX8 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Scn1aA2APX8 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scn1aA2APX8 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Scn1aA2APX8 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Scn1aA2APX8 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Scn1aA2APX8 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scn1aA2APX8 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Scn1aA2APX8 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Scn1aA2APX8 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Scn1aA2APX8 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Scn1aA2APX8 Gm6647-201ENSMUST00000170514 641 ntBASIC5.16□□□□□ -1.58
Scn1aA2APX8 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Scn1aA2APX8 Gm37636-201ENSMUST00000193583 359 ntBASIC5.16□□□□□ -1.58
Scn1aA2APX8 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.16□□□□□ -1.58
Scn1aA2APX8 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Scn1aA2APX8 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC5.16□□□□□ -1.58
Scn1aA2APX8 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.16□□□□□ -1.58
Scn1aA2APX8 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.16□□□□□ -1.58
Scn1aA2APX8 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Scn1aA2APX8 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Scn1aA2APX8 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Scn1aA2APX8 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Scn1aA2APX8 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Scn1aA2APX8 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.16□□□□□ -1.58
Scn1aA2APX8 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Scn1aA2APX8 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Scn1aA2APX8 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Scn1aA2APX8 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Scn1aA2APX8 Gm23594-201ENSMUST00000104307 134 ntBASIC5.16□□□□□ -1.58
Scn1aA2APX8 Gm15034-201ENSMUST00000120043 349 ntBASIC5.16□□□□□ -1.58
Scn1aA2APX8 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.16□□□□□ -1.58
Scn1aA2APX8 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5.16□□□□□ -1.58
Scn1aA2APX8 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Scn1aA2APX8 Gm3362-201ENSMUST00000148102 466 ntBASIC5.16□□□□□ -1.58
Scn1aA2APX8 Mir6344-201ENSMUST00000183462 104 ntBASIC5.16□□□□□ -1.58
Scn1aA2APX8 Gm9687-201ENSMUST00000189312 602 ntBASIC5.16□□□□□ -1.58
Scn1aA2APX8 Gm34224-201ENSMUST00000204606 364 ntBASIC5.16□□□□□ -1.58
Scn1aA2APX8 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.16□□□□□ -1.58
Scn1aA2APX8 Gm44648-201ENSMUST00000208267 329 ntBASIC5.16□□□□□ -1.58
Scn1aA2APX8 Gm3816-201ENSMUST00000209803 433 ntBASIC5.16□□□□□ -1.58
Scn1aA2APX8 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Scn1aA2APX8 Gm8264-201ENSMUST00000217801 465 ntBASIC5.16□□□□□ -1.58
Scn1aA2APX8 Gm8158-201ENSMUST00000219220 465 ntBASIC5.16□□□□□ -1.58
Scn1aA2APX8 Gm8112-201ENSMUST00000219637 465 ntBASIC5.16□□□□□ -1.58
Scn1aA2APX8 Gm24031-201ENSMUST00000083930 131 ntBASIC5.16□□□□□ -1.58
Scn1aA2APX8 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
Scn1aA2APX8 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Scn1aA2APX8 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.16□□□□□ -1.58
Scn1aA2APX8 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Scn1aA2APX8 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.16□□□□□ -1.58
Scn1aA2APX8 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Scn1aA2APX8 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Scn1aA2APX8 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.15□□□□□ -1.58
Scn1aA2APX8 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Scn1aA2APX8 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC5.15□□□□□ -1.58
Scn1aA2APX8 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Scn1aA2APX8 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Scn1aA2APX8 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
Scn1aA2APX8 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Scn1aA2APX8 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.15□□□□□ -1.58
Scn1aA2APX8 Gm37332-201ENSMUST00000195853 2844 ntBASIC5.15□□□□□ -1.58
Scn1aA2APX8 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Scn1aA2APX8 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
Scn1aA2APX8 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Scn1aA2APX8 Gm23879-201ENSMUST00000116874 126 ntBASIC5.15□□□□□ -1.58
Scn1aA2APX8 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.15□□□□□ -1.58
Scn1aA2APX8 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.15□□□□□ -1.58
Scn1aA2APX8 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC5.15□□□□□ -1.58
Scn1aA2APX8 Gm28941-201ENSMUST00000185536 1017 ntBASIC5.15□□□□□ -1.58
Scn1aA2APX8 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.15□□□□□ -1.58
Scn1aA2APX8 Gm43237-201ENSMUST00000196835 1044 ntBASIC5.15□□□□□ -1.58
Scn1aA2APX8 Gm29785-201ENSMUST00000217033 383 ntBASIC5.15□□□□□ -1.58
Scn1aA2APX8 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Scn1aA2APX8 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms