Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm44144-201ENSMUST00000203683 1960 ntBASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm43389-201ENSMUST00000196080 2595 ntBASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm37181-201ENSMUST00000192513 1727 ntBASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm25595-201ENSMUST00000102273 97 ntBASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm24235-201ENSMUST00000104319 129 ntBASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm24561-201ENSMUST00000175182 95 ntBASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm22917-201ENSMUST00000180116 110 ntBASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm37445-201ENSMUST00000195318 242 ntBASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm5284-201ENSMUST00000199053 903 ntBASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm44412-201ENSMUST00000203018 294 ntBASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 AC153840.1-201ENSMUST00000219685 313 ntBASIC4.84□□□□□ -1.63
Cdc40Q9DC48 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 CT954323.2-201ENSMUST00000222056 213 ntBASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 AC116724.1-201ENSMUST00000227900 972 ntBASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 n-R5s62-201ENSMUST00000082780 96 ntBASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
Cdc40Q9DC48 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Cdc40Q9DC48 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC4.84□□□□□ -1.64
Cdc40Q9DC48 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC4.84□□□□□ -1.64
Cdc40Q9DC48 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Cdc40Q9DC48 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Gm16394-201ENSMUST00000117289 675 ntBASIC4.83□□□□□ -1.64
Cdc40Q9DC48 H3f3c-201ENSMUST00000119459 411 ntBASIC4.83□□□□□ -1.64
Cdc40Q9DC48 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Mir5103-201ENSMUST00000175111 79 ntBASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Gm22355-201ENSMUST00000175531 96 ntBASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Gm19002-201ENSMUST00000192649 1012 ntBASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Gm9317-201ENSMUST00000197055 862 ntBASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Gm42542-201ENSMUST00000197978 268 ntBASIC4.83□□□□□ -1.64
Cdc40Q9DC48 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Gm8719-201ENSMUST00000203602 534 ntBASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Gm19065-202ENSMUST00000203910 1165 ntBASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Gm45908-201ENSMUST00000212977 1177 ntBASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC4.83□□□□□ -1.64
Cdc40Q9DC48 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 105.5 ms