Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm23511-201ENSMUST00000083084 164 ntBASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Gm23456-201ENSMUST00000083335 137 ntBASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.52□□□□□ -1.53
Vps28Q9D1C8 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.52□□□□□ -1.53
Vps28Q9D1C8 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm25758-201ENSMUST00000103987 129 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm25919-201ENSMUST00000104271 132 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm14769-201ENSMUST00000118590 432 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm14871-201ENSMUST00000119056 194 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm11484-201ENSMUST00000119808 338 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Mir6412-201ENSMUST00000184477 97 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28604-201ENSMUST00000186629 484 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28566-201ENSMUST00000186714 484 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28194-201ENSMUST00000187412 484 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28886-202ENSMUST00000187889 484 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28554-202ENSMUST00000189175 484 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm29213-202ENSMUST00000189703 484 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28851-202ENSMUST00000189757 484 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28461-201ENSMUST00000190023 484 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms