Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm21232-201ENSMUST00000182187 1006 ntBASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Gm26993-201ENSMUST00000182766 789 ntBASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Gm29489-201ENSMUST00000188934 324 ntBASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Gm28639-201ENSMUST00000191519 481 ntBASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 AC157822.1-201ENSMUST00000196643 80 ntBASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Gm43491-201ENSMUST00000197133 784 ntBASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 AC152979.4-201ENSMUST00000219893 379 ntBASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Gm7042-201ENSMUST00000223027 384 ntBASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 AC158981.3-201ENSMUST00000226844 1024 ntBASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Olfr519-201ENSMUST00000084752 960 ntBASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Gm37482-201ENSMUST00000194899 2791 ntBASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Ddx56Q9D0R4 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm37356-201ENSMUST00000193362 1613 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm11902-201ENSMUST00000118849 270 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm13341-201ENSMUST00000120780 672 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm13471-201ENSMUST00000122057 433 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm13194-201ENSMUST00000142299 311 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm22867-201ENSMUST00000157499 109 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm22599-201ENSMUST00000157597 132 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm19560-201ENSMUST00000177510 514 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm7745-201ENSMUST00000182235 973 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm29460-201ENSMUST00000188607 714 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm7897-201ENSMUST00000193981 554 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm42461-201ENSMUST00000198627 1150 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm43493-201ENSMUST00000199837 202 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm19232-201ENSMUST00000211621 652 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm33242-201ENSMUST00000212130 1057 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 AC112680.2-201ENSMUST00000213119 595 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm19709-201ENSMUST00000215403 482 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 AC159244.1-201ENSMUST00000220964 594 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 AC134468.2-201ENSMUST00000222549 672 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 AC168880.1-201ENSMUST00000225113 707 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 AC140209.1-204ENSMUST00000226736 739 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Vmn1r41-205ENSMUST00000227630 827 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm5612-201ENSMUST00000053326 375 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 n-R5s161-201ENSMUST00000083728 114 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 AC162908.1-201ENSMUST00000219164 4563 ntBASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Gm45160-201ENSMUST00000207112 3099 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms