Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Gm38374-201ENSMUST00000194417 2033 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RpainQ9CWY9 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm37504-201ENSMUST00000192537 2374 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm15016-201ENSMUST00000117300 720 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm14985-201ENSMUST00000118693 786 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm5943-201ENSMUST00000119458 459 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Mup-ps16-201ENSMUST00000120085 596 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm12103-201ENSMUST00000121892 362 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm24477-201ENSMUST00000157438 103 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm18128-201ENSMUST00000172625 511 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm21909-201ENSMUST00000178260 439 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm27659-201ENSMUST00000183472 98 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC6.2□□□□□ -1.42
RpainQ9CWY9 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm45127-201ENSMUST00000205984 1015 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm36371-201ENSMUST00000209043 1103 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm45658-201ENSMUST00000209197 580 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm45722-201ENSMUST00000213075 466 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RpainQ9CWY9 CT030166.1-201ENSMUST00000222654 357 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
RpainQ9CWY9 AC164426.1-201ENSMUST00000225745 929 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Olfr192-201ENSMUST00000080251 925 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm26063-201ENSMUST00000083378 107 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RpainQ9CWY9 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm44242-201ENSMUST00000204212 2721 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm38067-201ENSMUST00000192346 1911 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Gm15189-201ENSMUST00000121164 1966 ntBASIC6.2□□□□□ -1.42
RpainQ9CWY9 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
RpainQ9CWY9 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
RpainQ9CWY9 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RpainQ9CWY9 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
RpainQ9CWY9 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
RpainQ9CWY9 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC6.19□□□□□ -1.42
RpainQ9CWY9 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RpainQ9CWY9 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC6.19□□□□□ -1.42
RpainQ9CWY9 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RpainQ9CWY9 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm13454-201ENSMUST00000118166 483 ntBASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm12442-201ENSMUST00000118372 338 ntBASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm14411-201ENSMUST00000121798 914 ntBASIC6.19□□□□□ -1.42
RpainQ9CWY9 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm17366-201ENSMUST00000167629 187 ntBASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm22655-201ENSMUST00000174949 96 ntBASIC6.19□□□□□ -1.42
RpainQ9CWY9 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC6.19□□□□□ -1.42
RpainQ9CWY9 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm6472-201ENSMUST00000178147 651 ntBASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm19200-201ENSMUST00000182579 1001 ntBASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC6.19□□□□□ -1.42
RpainQ9CWY9 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm37979-201ENSMUST00000193065 712 ntBASIC6.19□□□□□ -1.42
RpainQ9CWY9 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm44319-201ENSMUST00000196974 93 ntBASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm7166-201ENSMUST00000199715 303 ntBASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm18009-201ENSMUST00000203239 1016 ntBASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm29781-201ENSMUST00000203862 478 ntBASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm43954-201ENSMUST00000204634 544 ntBASIC6.19□□□□□ -1.42
RpainQ9CWY9 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 112 ms