Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm37114-201ENSMUST00000195065 1804 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Use1Q9CQ56 Gm37010-201ENSMUST00000194539 1704 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Use1Q9CQ56 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.81□□□□□ -1.64
Use1Q9CQ56 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Use1Q9CQ56 Gm24789-201ENSMUST00000104282 131 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 Gm11486-201ENSMUST00000107322 478 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 Gm14772-201ENSMUST00000116562 514 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 Gm11742-201ENSMUST00000119903 233 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 Mup-ps19-201ENSMUST00000120390 519 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 Gm13484-201ENSMUST00000120738 412 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 Gm11677-201ENSMUST00000121349 977 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Use1Q9CQ56 Gm26086-201ENSMUST00000157902 263 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC4.81□□□□□ -1.64
Use1Q9CQ56 Gm27854-201ENSMUST00000175578 244 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Use1Q9CQ56 Mir6417-201ENSMUST00000183815 116 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Use1Q9CQ56 Gm19057-201ENSMUST00000194329 1197 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 Gm8861-201ENSMUST00000196346 832 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 Gm20239-201ENSMUST00000196610 982 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 Gm34149-201ENSMUST00000203547 304 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 AC140409.4-201ENSMUST00000215757 538 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC4.81□□□□□ -1.64
Use1Q9CQ56 Gm2645-201ENSMUST00000223516 547 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 Gm25134-201ENSMUST00000082646 160 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 n-R5s62-201ENSMUST00000082780 96 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Use1Q9CQ56 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
Use1Q9CQ56 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Use1Q9CQ56 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Use1Q9CQ56 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 AC122357.1-201ENSMUST00000221652 1515 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Use1Q9CQ56 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Use1Q9CQ56 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Use1Q9CQ56 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Use1Q9CQ56 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.81□□□□□ -1.64
Use1Q9CQ56 Gm42661-201ENSMUST00000202364 1442 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm42561-201ENSMUST00000202563 1442 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm37607-201ENSMUST00000194925 2623 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Use1Q9CQ56 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm22592-201ENSMUST00000104242 131 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm7312-201ENSMUST00000118798 469 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm14335-201ENSMUST00000119165 810 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm15791-201ENSMUST00000120365 319 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm7670-201ENSMUST00000121272 641 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm23837-201ENSMUST00000122656 286 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm22596-201ENSMUST00000157601 316 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm26404-201ENSMUST00000158498 109 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm10784-201ENSMUST00000178715 238 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm22254-201ENSMUST00000179186 110 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm27541-201ENSMUST00000184078 122 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm27818-201ENSMUST00000184536 159 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm19206-201ENSMUST00000186401 827 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm38097-201ENSMUST00000192936 439 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm36998-201ENSMUST00000193205 704 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm10048-201ENSMUST00000194196 372 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm37215-201ENSMUST00000194927 1259 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm44003-201ENSMUST00000203024 490 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC4.8□□□□□ -1.64
Use1Q9CQ56 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC4.8□□□□□ -1.64
Use1Q9CQ56 AC158803.2-201ENSMUST00000219452 679 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Nsa2-203ENSMUST00000225410 974 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Mir365-2-201ENSMUST00000083555 112 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.8□□□□□ -1.64
Use1Q9CQ56 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Use1Q9CQ56 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Use1Q9CQ56 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Use1Q9CQ56 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms