Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm15143-201ENSMUST00000178180 714 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm5947-201ENSMUST00000179156 714 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm5645-201ENSMUST00000179597 714 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm28625-201ENSMUST00000188309 205 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm43308-201ENSMUST00000197236 373 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm19457-201ENSMUST00000200995 448 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm19653-201ENSMUST00000204326 1039 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 AC171206.1-201ENSMUST00000213612 213 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 AC158803.2-201ENSMUST00000219452 679 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 AC163032.1-201ENSMUST00000220671 2970 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 AC154563.1-201ENSMUST00000228317 442 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 n-R5s180-201ENSMUST00000082770 106 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm20644-201ENSMUST00000176721 2063 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Ap5m1-208ENSMUST00000228238 3514 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm8141-201ENSMUST00000190856 1723 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 CT009757.5-201ENSMUST00000221858 3425 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm26384-201ENSMUST00000102183 110 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm24430-201ENSMUST00000104077 104 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm16082-201ENSMUST00000115992 377 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm8250-201ENSMUST00000117398 774 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm12924-201ENSMUST00000121747 318 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Mup-ps12-201ENSMUST00000126217 549 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm4202-201ENSMUST00000169025 733 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm5283-201ENSMUST00000177874 334 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm9541-201ENSMUST00000188409 502 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm29490-201ENSMUST00000190923 342 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm37758-201ENSMUST00000194275 629 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm37838-201ENSMUST00000194464 312 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm43354-201ENSMUST00000196862 346 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Igkv15-97-201ENSMUST00000197637 339 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm43228-201ENSMUST00000200735 264 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm17893-201ENSMUST00000203017 770 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm17834-201ENSMUST00000204322 891 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm44972-201ENSMUST00000206419 406 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 AC162376.1-201ENSMUST00000220120 435 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 AC079644.2-201ENSMUST00000220581 322 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm3785-201ENSMUST00000221000 202 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms