Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm19086-201ENSMUST00000190772 665 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm28467-201ENSMUST00000190981 318 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm37308-201ENSMUST00000194684 100 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm44395-201ENSMUST00000197056 153 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Mir703-201ENSMUST00000197105 109 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm31532-201ENSMUST00000203555 767 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm4374-201ENSMUST00000204929 424 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm45700-201ENSMUST00000205866 347 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CopaQ8CIE6 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 AC126043.1-201ENSMUST00000221304 1141 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm32526-201ENSMUST00000221878 981 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 AC154510.1-201ENSMUST00000223925 737 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CopaQ8CIE6 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm23330-201ENSMUST00000082660 164 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm38029-201ENSMUST00000192669 2090 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CopaQ8CIE6 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CopaQ8CIE6 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 AC139754.3-201ENSMUST00000220444 1627 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Klra14-ps-201ENSMUST00000119532 802 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm13430-201ENSMUST00000121366 288 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm14679-201ENSMUST00000121536 722 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm23250-201ENSMUST00000157444 267 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm16147-201ENSMUST00000162143 373 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm8032-201ENSMUST00000171009 574 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm22857-201ENSMUST00000174969 134 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm22392-201ENSMUST00000177971 107 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm21756-201ENSMUST00000178380 930 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm21405-201ENSMUST00000179024 930 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm21191-201ENSMUST00000186484 930 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm29159-201ENSMUST00000187969 379 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm20954-201ENSMUST00000189078 644 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm29503-201ENSMUST00000191044 930 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm18855-201ENSMUST00000206689 570 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm45722-201ENSMUST00000213075 466 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CopaQ8CIE6 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm7042-201ENSMUST00000223027 384 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm17165-201ENSMUST00000096155 493 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CopaQ8CIE6 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.7□□□□□ -1.5
CopaQ8CIE6 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CopaQ8CIE6 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.69□□□□□ -1.5
CopaQ8CIE6 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CopaQ8CIE6 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CopaQ8CIE6 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CopaQ8CIE6 AW046200-203ENSMUST00000211787 2479 ntBASIC5.69□□□□□ -1.5
CopaQ8CIE6 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CopaQ8CIE6 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CopaQ8CIE6 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms