Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm37631-201ENSMUST00000192275 364 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Ighv10-4-201ENSMUST00000193702 299 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Gm43044-201ENSMUST00000198091 379 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Gm18660-201ENSMUST00000199542 629 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Ighv1-83-201ENSMUST00000199643 351 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Gm3257-201ENSMUST00000207217 675 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 AC159252.1-201ENSMUST00000224450 553 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Gm4991-201ENSMUST00000118899 1552 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Gm42968-201ENSMUST00000198578 1372 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Gm21037-201ENSMUST00000209086 2608 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Gm11196-201ENSMUST00000119052 395 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Gm14237-201ENSMUST00000122080 430 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Gm23408-201ENSMUST00000158523 265 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Gm3216-201ENSMUST00000166927 486 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Gm3141-201ENSMUST00000168726 499 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr331-202ENSMUST00000170501 957 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Gm5066-201ENSMUST00000188479 822 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Gm38216-201ENSMUST00000194872 1214 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Gm43382-201ENSMUST00000198954 838 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Gm4714-201ENSMUST00000203395 279 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Gm45078-201ENSMUST00000205343 546 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Gm4083-201ENSMUST00000207158 451 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Gm45498-201ENSMUST00000210346 283 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 AC134254.4-201ENSMUST00000223086 370 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Gm23508-201ENSMUST00000083079 72 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Gm43528-201ENSMUST00000199492 1674 ntBASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc28bQ8CEG5 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm11448-201ENSMUST00000120427 450 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm12105-201ENSMUST00000120846 779 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm14776-201ENSMUST00000121029 887 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm13232-201ENSMUST00000121816 632 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms