Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm5374-201ENSMUST00000222868 657 ntBASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Gm23423-201ENSMUST00000082782 106 ntBASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Gm7919-201ENSMUST00000202043 1389 ntBASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Gm37060-201ENSMUST00000194997 2397 ntBASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Usp40Q8BWR4 AC158938.1-201ENSMUST00000225372 6720 ntBASIC7.52□□□□□ -1.2
Usp40Q8BWR4 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Usp40Q8BWR4 Gm44424-201ENSMUST00000203438 1826 ntBASIC7.52□□□□□ -1.2
Usp40Q8BWR4 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Usp40Q8BWR4 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
Usp40Q8BWR4 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Gm24429-201ENSMUST00000104076 132 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Gm12287-201ENSMUST00000119770 707 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Mir5112-201ENSMUST00000174897 60 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Gm10784-201ENSMUST00000178715 238 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Gm38166-201ENSMUST00000191660 471 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Gm2367-201ENSMUST00000192374 472 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Gm37760-201ENSMUST00000194726 3841 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Trav15d-3-201ENSMUST00000198604 167 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Gm17911-201ENSMUST00000210806 877 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Gm18039-201ENSMUST00000217816 728 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 AC153961.2-201ENSMUST00000218877 164 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 AC164116.2-201ENSMUST00000225398 1038 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 AC161383.1-201ENSMUST00000227356 527 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Gm24706-201ENSMUST00000082806 137 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Gm23970-201ENSMUST00000083319 107 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 AC163731.1-201ENSMUST00000225696 3118 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Gm43359-201ENSMUST00000197944 2200 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Gm44797-201ENSMUST00000208780 1837 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 AC164567.3-201ENSMUST00000217743 2869 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Gm8853-201ENSMUST00000198366 1344 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
Usp40Q8BWR4 AC134860.3-201ENSMUST00000223564 1300 ntBASIC7.52□□□□□ -1.21
Usp40Q8BWR4 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Gm42686-201ENSMUST00000199172 4108 ntBASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Gm5754-201ENSMUST00000118774 892 ntBASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Gm11679-201ENSMUST00000121830 779 ntBASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC7.51□□□□□ -1.21
Usp40Q8BWR4 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Mir7116-201ENSMUST00000195956 70 ntBASIC7.51□□□□□ -1.21
Usp40Q8BWR4 AC124542.1-201ENSMUST00000205588 908 ntBASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Gm18193-201ENSMUST00000210017 772 ntBASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 AC153840.1-201ENSMUST00000219685 313 ntBASIC7.51□□□□□ -1.21
Usp40Q8BWR4 AC124732.4-201ENSMUST00000220930 1274 ntBASIC7.51□□□□□ -1.21
Usp40Q8BWR4 AC154692.1-201ENSMUST00000228314 544 ntBASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms