Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm23211-201ENSMUST00000122717 308 ntBASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Gm23030-201ENSMUST00000158004 273 ntBASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Gm26352-201ENSMUST00000158223 125 ntBASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Gm3076-201ENSMUST00000161613 451 ntBASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Gm23633-201ENSMUST00000175293 119 ntBASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Gm6055-201ENSMUST00000180532 378 ntBASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Gm28803-201ENSMUST00000190385 764 ntBASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Gm37517-201ENSMUST00000194004 1289 ntBASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Gm42663-201ENSMUST00000199883 351 ntBASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Gm9038-201ENSMUST00000203400 604 ntBASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Gm44074-201ENSMUST00000204562 337 ntBASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Gm4574-201ENSMUST00000207804 542 ntBASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Gm45422-201ENSMUST00000211476 246 ntBASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 CT033778.1-201ENSMUST00000224767 767 ntBASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Gm10064-201ENSMUST00000071235 399 ntBASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 AC136019.1-201ENSMUST00000226503 1412 ntBASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC5.48□□□□□ -1.53
Ccdc40Q8BI79 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm13579-201ENSMUST00000118519 517 ntBASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm12244-201ENSMUST00000119500 291 ntBASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm25660-201ENSMUST00000158470 104 ntBASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm27044-201ENSMUST00000183033 796 ntBASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm9320-201ENSMUST00000184151 473 ntBASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm19029-201ENSMUST00000189923 564 ntBASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm9480-201ENSMUST00000198038 616 ntBASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Mir409-201ENSMUST00000198153 79 ntBASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm44162-201ENSMUST00000203543 544 ntBASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm44132-201ENSMUST00000205142 151 ntBASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 AC166358.4-201ENSMUST00000223030 105 ntBASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 CT030662.3-201ENSMUST00000228751 476 ntBASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC5.47□□□□□ -1.53
Ccdc40Q8BI79 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
Ccdc40Q8BI79 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Ccdc40Q8BI79 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Ccdc40Q8BI79 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Ccdc40Q8BI79 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.53
Ccdc40Q8BI79 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Ccdc40Q8BI79 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Ccdc40Q8BI79 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Gm22592-201ENSMUST00000104242 131 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms