Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 AC166159.1-201ENSMUST00000227154 1380 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Foxc1Q61572 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Foxc1Q61572 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Foxc1Q61572 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Foxc1Q61572 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Foxc1Q61572 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm44186-201ENSMUST00000204118 2752 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm7134-201ENSMUST00000122296 2406 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm37326-201ENSMUST00000192828 3071 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Foxc1Q61572 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Foxc1Q61572 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm25083-201ENSMUST00000102319 92 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Foxc1Q61572 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Foxc1Q61572 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Foxc1Q61572 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Foxc1Q61572 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm13526-201ENSMUST00000117970 189 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm14240-201ENSMUST00000120353 546 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.49□□□□□ -1.53
Foxc1Q61572 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm7244-201ENSMUST00000164658 455 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm6838-201ENSMUST00000172851 582 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm20415-201ENSMUST00000172877 423 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm27193-201ENSMUST00000184217 586 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm21181-201ENSMUST00000186249 330 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm28847-201ENSMUST00000186778 700 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC5.49□□□□□ -1.53
Foxc1Q61572 Ighv1-73-201ENSMUST00000197435 352 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm7542-201ENSMUST00000201140 777 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm4605-201ENSMUST00000203148 625 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm44063-201ENSMUST00000203307 376 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC5.49□□□□□ -1.53
Foxc1Q61572 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC5.49□□□□□ -1.53
Foxc1Q61572 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 AC238940.2-201ENSMUST00000224202 330 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 AC117769.2-201ENSMUST00000224612 469 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 AC160958.1-201ENSMUST00000224833 368 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 AC162183.1-201ENSMUST00000224843 472 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 AC130673.1-201ENSMUST00000227992 435 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm2531-201ENSMUST00000075609 512 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm22508-201ENSMUST00000082772 110 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Foxc1Q61572 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC5.49□□□□□ -1.53
Foxc1Q61572 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Foxc1Q61572 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Foxc1Q61572 Gm38156-201ENSMUST00000194601 2260 ntBASIC5.49□□□□□ -1.53
Foxc1Q61572 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
Foxc1Q61572 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Foxc1Q61572 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Foxc1Q61572 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Foxc1Q61572 Gm37169-201ENSMUST00000195599 4161 ntBASIC5.48□□□□□ -1.53
Foxc1Q61572 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC5.48□□□□□ -1.53
Foxc1Q61572 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.48□□□□□ -1.53
Foxc1Q61572 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms