Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Shank3Q4ACU6 AC137842.3-201ENSMUST00000228855 2397 ntBASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Gm15206-201ENSMUST00000119143 454 ntBASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Gm13867-201ENSMUST00000120844 395 ntBASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Gm12752-201ENSMUST00000121657 811 ntBASIC6.25□□□□□ -1.41
Shank3Q4ACU6 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Gm4842-201ENSMUST00000183237 835 ntBASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Gm37416-201ENSMUST00000193596 318 ntBASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Gm43968-201ENSMUST00000203388 389 ntBASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Gm3912-203ENSMUST00000211024 367 ntBASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Shank3Q4ACU6 AC158511.1-201ENSMUST00000223622 764 ntBASIC6.25□□□□□ -1.41
Shank3Q4ACU6 CT009600.2-201ENSMUST00000226638 481 ntBASIC6.25□□□□□ -1.41
Shank3Q4ACU6 AC133189.2-201ENSMUST00000228527 392 ntBASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.25□□□□□ -1.41
Shank3Q4ACU6 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Shank3Q4ACU6 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Shank3Q4ACU6 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Gm43281-201ENSMUST00000202522 2704 ntBASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Gm13250-201ENSMUST00000117209 753 ntBASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Gm25058-201ENSMUST00000157365 128 ntBASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Gm16107-201ENSMUST00000162523 862 ntBASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Gm9443-201ENSMUST00000188406 816 ntBASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Gm18426-201ENSMUST00000191874 973 ntBASIC6.25□□□□□ -1.41
Shank3Q4ACU6 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Shank3Q4ACU6 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Shank3Q4ACU6 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Shank3Q4ACU6 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Mir761-201ENSMUST00000103245 76 ntBASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Gm14610-201ENSMUST00000118358 966 ntBASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Gm14688-201ENSMUST00000119169 303 ntBASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Gm22343-201ENSMUST00000122648 286 ntBASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Mir5710-201ENSMUST00000176884 69 ntBASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Gm2522-201ENSMUST00000204280 322 ntBASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Shank3Q4ACU6 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC6.24□□□□□ -1.41
Shank3Q4ACU6 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Gm7093-201ENSMUST00000223004 581 ntBASIC6.24□□□□□ -1.41
Shank3Q4ACU6 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Shank3Q4ACU6 AC151904.4-201ENSMUST00000219868 1319 ntBASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Gm44171-201ENSMUST00000203701 2109 ntBASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Shank3Q4ACU6 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Gm15779-201ENSMUST00000117470 412 ntBASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Gm23046-201ENSMUST00000158369 284 ntBASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Gm37636-201ENSMUST00000193583 359 ntBASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Gm26330-201ENSMUST00000082817 104 ntBASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Gm37226-201ENSMUST00000191644 3255 ntBASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Smc5-206ENSMUST00000226111 3265 ntBASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Shank3Q4ACU6 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms