Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Nkx3-2P97503 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx3-2P97503 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx3-2P97503 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-2P97503 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm22370-201ENSMUST00000102422 83 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm12193-201ENSMUST00000117250 379 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm14930-201ENSMUST00000118864 652 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm11848-201ENSMUST00000121207 973 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm12770-201ENSMUST00000121734 462 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm15237-201ENSMUST00000122104 469 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.7□□□□□ -1.5
Nkx3-2P97503 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm24359-201ENSMUST00000158418 221 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm23450-201ENSMUST00000178285 91 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm23186-201ENSMUST00000180078 107 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Mir7220-201ENSMUST00000183978 60 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm28788-201ENSMUST00000189717 375 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm29558-201ENSMUST00000190134 375 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm37511-201ENSMUST00000192901 294 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm5990-201ENSMUST00000203126 746 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm5306-201ENSMUST00000203325 757 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm44058-201ENSMUST00000204335 467 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm5318-201ENSMUST00000205249 406 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm18414-201ENSMUST00000210858 694 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm45850-201ENSMUST00000212536 338 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 AC116726.2-201ENSMUST00000217629 986 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC5.7□□□□□ -1.5
Nkx3-2P97503 AC152979.4-201ENSMUST00000219893 379 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-2P97503 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
Nkx3-2P97503 AC120153.1-201ENSMUST00000226502 1311 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.7□□□□□ -1.5
Nkx3-2P97503 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-2P97503 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Nkx3-2P97503 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Nkx3-2P97503 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nkx3-2P97503 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.69□□□□□ -1.5
Nkx3-2P97503 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nkx3-2P97503 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nkx3-2P97503 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nkx3-2P97503 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nkx3-2P97503 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Nkx3-2P97503 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Nkx3-2P97503 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.69□□□□□ -1.5
Nkx3-2P97503 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.69□□□□□ -1.5
Nkx3-2P97503 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nkx3-2P97503 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nkx3-2P97503 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nkx3-2P97503 Gm18878-201ENSMUST00000223071 1443 ntBASIC5.69□□□□□ -1.5
Nkx3-2P97503 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Nkx3-2P97503 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC5.69□□□□□ -1.5
Nkx3-2P97503 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.69□□□□□ -1.5
Nkx3-2P97503 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nkx3-2P97503 Gm12077-201ENSMUST00000117049 364 ntBASIC5.69□□□□□ -1.5
Nkx3-2P97503 Gm13193-201ENSMUST00000117275 225 ntBASIC5.69□□□□□ -1.5
Nkx3-2P97503 Gm10241-201ENSMUST00000117664 286 ntBASIC5.69□□□□□ -1.5
Nkx3-2P97503 Gm13811-201ENSMUST00000117800 256 ntBASIC5.69□□□□□ -1.5
Nkx3-2P97503 Gm9429-201ENSMUST00000117804 868 ntBASIC5.69□□□□□ -1.5
Nkx3-2P97503 Gm11852-201ENSMUST00000120806 222 ntBASIC5.69□□□□□ -1.5
Nkx3-2P97503 Gm9428-201ENSMUST00000127214 769 ntBASIC5.69□□□□□ -1.5
Nkx3-2P97503 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.69□□□□□ -1.5
Nkx3-2P97503 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Nkx3-2P97503 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nkx3-2P97503 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nkx3-2P97503 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms