Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm28769-201ENSMUST00000190176 615 ntBASIC4.47□□□□□ -1.69
Nkx3-1P97436 Gm10048-201ENSMUST00000194196 372 ntBASIC4.47□□□□□ -1.69
Nkx3-1P97436 Gm2623-201ENSMUST00000199229 286 ntBASIC4.47□□□□□ -1.69
Nkx3-1P97436 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC4.47□□□□□ -1.69
Nkx3-1P97436 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Nkx3-1P97436 CT030124.1-201ENSMUST00000217130 235 ntBASIC4.47□□□□□ -1.69
Nkx3-1P97436 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC4.47□□□□□ -1.69
Nkx3-1P97436 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.47□□□□□ -1.69
Nkx3-1P97436 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Nkx3-1P97436 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
Nkx3-1P97436 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Nkx3-1P97436 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Nkx3-1P97436 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC4.47□□□□□ -1.69
Nkx3-1P97436 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Nkx3-1P97436 Smc5-206ENSMUST00000226111 3265 ntBASIC4.47□□□□□ -1.69
Nkx3-1P97436 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC4.47□□□□□ -1.69
Nkx3-1P97436 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Nkx3-1P97436 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Nkx3-1P97436 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Nkx3-1P97436 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Nkx3-1P97436 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Nkx3-1P97436 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Nkx3-1P97436 Gm38126-201ENSMUST00000195297 4003 ntBASIC4.47□□□□□ -1.69
Nkx3-1P97436 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Nkx3-1P97436 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
Nkx3-1P97436 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
Nkx3-1P97436 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC4.46□□□□□ -1.69
Nkx3-1P97436 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC4.46□□□□□ -1.69
Nkx3-1P97436 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.46□□□□□ -1.69
Nkx3-1P97436 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Nkx3-1P97436 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.69
Nkx3-1P97436 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.69
Nkx3-1P97436 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Nkx3-1P97436 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
Nkx3-1P97436 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Nkx3-1P97436 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Nkx3-1P97436 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm23948-201ENSMUST00000104030 132 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm22468-201ENSMUST00000116680 120 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm26248-201ENSMUST00000116700 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm26137-201ENSMUST00000116701 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm26190-201ENSMUST00000116704 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm24617-201ENSMUST00000116705 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm25778-201ENSMUST00000116713 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm25774-201ENSMUST00000116717 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm22102-201ENSMUST00000116730 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm23177-201ENSMUST00000116784 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm24193-201ENSMUST00000116801 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm24744-201ENSMUST00000116833 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm24427-201ENSMUST00000116896 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm22346-201ENSMUST00000116918 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm23606-201ENSMUST00000116938 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm22029-201ENSMUST00000116940 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm26298-201ENSMUST00000116956 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm23844-201ENSMUST00000116959 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm24484-201ENSMUST00000117009 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm25347-201ENSMUST00000117026 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm22112-201ENSMUST00000117032 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm12131-201ENSMUST00000117479 359 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm13452-201ENSMUST00000120896 1097 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm22326-201ENSMUST00000158897 351 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm22991-201ENSMUST00000178126 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm25754-201ENSMUST00000178653 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm22419-201ENSMUST00000178780 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm24802-201ENSMUST00000178897 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm25208-201ENSMUST00000178964 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm24567-201ENSMUST00000179294 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm23943-201ENSMUST00000179712 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm25228-201ENSMUST00000180121 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm23304-201ENSMUST00000180209 121 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm38360-201ENSMUST00000195130 454 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Mir6516-201ENSMUST00000196236 110 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm44319-201ENSMUST00000196974 93 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm44259-201ENSMUST00000204996 298 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Nkx3-1P97436 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm29785-201ENSMUST00000217033 383 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 AC121986.1-201ENSMUST00000218588 781 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 CT954323.2-201ENSMUST00000222056 213 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Nkx3-1P97436 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Nkx3-1P97436 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Nkx3-1P97436 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm19113-201ENSMUST00000217552 1828 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Nkx3-1P97436 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.46□□□□□ -1.7
Nkx3-1P97436 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Nkx3-1P97436 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Nkx3-1P97436 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Nkx3-1P97436 Gm43333-201ENSMUST00000198340 2262 ntBASIC4.46□□□□□ -1.7
Nkx3-1P97436 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Nkx3-1P97436 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Nkx3-1P97436 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms