Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Sox3P53784 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5□□□□□ -1.61
Sox3P53784 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5□□□□□ -1.61
Sox3P53784 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Sox3P53784 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5□□□□□ -1.61
Sox3P53784 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5□□□□□ -1.61
Sox3P53784 Gm24429-201ENSMUST00000104076 132 ntBASIC5□□□□□ -1.61
Sox3P53784 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5□□□□□ -1.61
Sox3P53784 Gm13000-201ENSMUST00000120937 496 ntBASIC5□□□□□ -1.61
Sox3P53784 Gm4852-201ENSMUST00000121202 729 ntBASIC5□□□□□ -1.61
Sox3P53784 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Sox3P53784 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5□□□□□ -1.61
Sox3P53784 Gm26069-201ENSMUST00000157497 277 ntBASIC5□□□□□ -1.61
Sox3P53784 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5□□□□□ -1.61
Sox3P53784 Gm6047-201ENSMUST00000167221 574 ntBASIC5□□□□□ -1.61
Sox3P53784 Gm10784-201ENSMUST00000178715 238 ntBASIC5□□□□□ -1.61
Sox3P53784 Gm27754-201ENSMUST00000183340 126 ntBASIC5□□□□□ -1.61
Sox3P53784 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sox3P53784 Gm18342-201ENSMUST00000186987 694 ntBASIC5□□□□□ -1.61
Sox3P53784 Gm2427-201ENSMUST00000189121 881 ntBASIC5□□□□□ -1.61
Sox3P53784 Mir6516-201ENSMUST00000196236 110 ntBASIC5□□□□□ -1.61
Sox3P53784 Gm43408-201ENSMUST00000198263 440 ntBASIC5□□□□□ -1.61
Sox3P53784 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sox3P53784 Gm3912-203ENSMUST00000211024 367 ntBASIC5□□□□□ -1.61
Sox3P53784 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5□□□□□ -1.61
Sox3P53784 Gm4263-201ENSMUST00000220693 1101 ntBASIC5□□□□□ -1.61
Sox3P53784 AC153794.2-201ENSMUST00000222650 550 ntBASIC5□□□□□ -1.61
Sox3P53784 AC125543.1-201ENSMUST00000222778 101 ntBASIC5□□□□□ -1.61
Sox3P53784 AC121137.1-201ENSMUST00000225272 602 ntBASIC5□□□□□ -1.61
Sox3P53784 CT030238.1-201ENSMUST00000228393 442 ntBASIC5□□□□□ -1.61
Sox3P53784 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Sox3P53784 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5□□□□□ -1.61
Sox3P53784 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5□□□□□ -1.61
Sox3P53784 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC5□□□□□ -1.61
Sox3P53784 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5□□□□□ -1.61
Sox3P53784 Snord59a-201ENSMUST00000082844 74 ntBASIC5□□□□□ -1.61
Sox3P53784 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sox3P53784 Gm42540-201ENSMUST00000200319 2008 ntBASIC5□□□□□ -1.61
Sox3P53784 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Sox3P53784 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sox3P53784 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Sox3P53784 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sox3P53784 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Sox3P53784 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5□□□□□ -1.61
Sox3P53784 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sox3P53784 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5□□□□□ -1.61
Sox3P53784 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5□□□□□ -1.61
Sox3P53784 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sox3P53784 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5□□□□□ -1.61
Sox3P53784 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Sox3P53784 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.99□□□□□ -1.61
Sox3P53784 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC4.99□□□□□ -1.61
Sox3P53784 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sox3P53784 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sox3P53784 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
Sox3P53784 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sox3P53784 AC132852.1-201ENSMUST00000214683 2324 ntBASIC4.99□□□□□ -1.61
Sox3P53784 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Sox3P53784 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Sox3P53784 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC4.99□□□□□ -1.61
Sox3P53784 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC4.99□□□□□ -1.61
Sox3P53784 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.99□□□□□ -1.61
Sox3P53784 Gm13737-201ENSMUST00000119793 232 ntBASIC4.99□□□□□ -1.61
Sox3P53784 Gm12190-201ENSMUST00000120001 187 ntBASIC4.99□□□□□ -1.61
Sox3P53784 Gm6461-201ENSMUST00000120015 633 ntBASIC4.99□□□□□ -1.61
Sox3P53784 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sox3P53784 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC4.99□□□□□ -1.61
Sox3P53784 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.99□□□□□ -1.61
Sox3P53784 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sox3P53784 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sox3P53784 Gm23958-201ENSMUST00000157207 105 ntBASIC4.99□□□□□ -1.61
Sox3P53784 Gm24905-201ENSMUST00000158129 104 ntBASIC4.99□□□□□ -1.61
Sox3P53784 Gm25224-201ENSMUST00000158195 68 ntBASIC4.99□□□□□ -1.61
Sox3P53784 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Sox3P53784 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC4.99□□□□□ -1.61
Sox3P53784 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC4.99□□□□□ -1.61
Sox3P53784 Gm23872-201ENSMUST00000175432 77 ntBASIC4.99□□□□□ -1.61
Sox3P53784 Gm8993-201ENSMUST00000182182 983 ntBASIC4.99□□□□□ -1.61
Sox3P53784 Gm27148-201ENSMUST00000185086 160 ntBASIC4.99□□□□□ -1.61
Sox3P53784 Gm27781-201ENSMUST00000185185 92 ntBASIC4.99□□□□□ -1.61
Sox3P53784 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.99□□□□□ -1.61
Sox3P53784 Gm29356-201ENSMUST00000186935 373 ntBASIC4.99□□□□□ -1.61
Sox3P53784 Gm28923-201ENSMUST00000187755 322 ntBASIC4.99□□□□□ -1.61
Sox3P53784 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sox3P53784 Gm44307-201ENSMUST00000204466 764 ntBASIC4.99□□□□□ -1.61
Sox3P53784 Gm45215-201ENSMUST00000206407 395 ntBASIC4.99□□□□□ -1.61
Sox3P53784 Gm45228-201ENSMUST00000206585 352 ntBASIC4.99□□□□□ -1.61
Sox3P53784 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sox3P53784 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC4.99□□□□□ -1.61
Sox3P53784 Prl7a1-203ENSMUST00000224852 1283 ntBASIC4.99□□□□□ -1.61
Sox3P53784 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sox3P53784 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC4.99□□□□□ -1.61
Sox3P53784 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Sox3P53784 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Sox3P53784 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sox3P53784 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sox3P53784 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sox3P53784 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Sox3P53784 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.99□□□□□ -1.61
Sox3P53784 Gm37140-201ENSMUST00000192914 1684 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms