Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Malat1-201ENSMUST00000172812 6983 ntBASIC5.71□□□□□ -1.5
Brca1P48754 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Brca1P48754 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Brca1P48754 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.71□□□□□ -1.5
Brca1P48754 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Brca1P48754 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.7□□□□□ -1.5
Brca1P48754 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.7□□□□□ -1.5
Brca1P48754 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Brca1P48754 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Brca1P48754 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Brca1P48754 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Brca1P48754 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Brca1P48754 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Brca1P48754 Gm23178-201ENSMUST00000116782 95 ntBASIC5.7□□□□□ -1.5
Brca1P48754 Gm12231-201ENSMUST00000119447 695 ntBASIC5.7□□□□□ -1.5
Brca1P48754 Gm11510-201ENSMUST00000120278 347 ntBASIC5.7□□□□□ -1.5
Brca1P48754 Gm3084-201ENSMUST00000169967 598 ntBASIC5.7□□□□□ -1.5
Brca1P48754 Gm6647-201ENSMUST00000170514 641 ntBASIC5.7□□□□□ -1.5
Brca1P48754 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Brca1P48754 Gm22177-201ENSMUST00000175002 158 ntBASIC5.7□□□□□ -1.5
Brca1P48754 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.7□□□□□ -1.5
Brca1P48754 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Brca1P48754 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.7□□□□□ -1.5
Brca1P48754 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.7□□□□□ -1.5
Brca1P48754 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.7□□□□□ -1.5
Brca1P48754 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.7□□□□□ -1.5
Brca1P48754 AC121804.1-201ENSMUST00000221016 394 ntBASIC5.7□□□□□ -1.5
Brca1P48754 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.7□□□□□ -1.5
Brca1P48754 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Brca1P48754 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.7□□□□□ -1.5
Brca1P48754 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.7□□□□□ -1.5
Brca1P48754 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Brca1P48754 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Brca1P48754 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Brca1P48754 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Brca1P48754 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Brca1P48754 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Brca1P48754 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Brca1P48754 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Brca1P48754 Gm23837-201ENSMUST00000122656 286 ntBASIC5.69□□□□□ -1.5
Brca1P48754 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Brca1P48754 Gm9134-201ENSMUST00000193186 551 ntBASIC5.69□□□□□ -1.5
Brca1P48754 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC5.69□□□□□ -1.5
Brca1P48754 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.69□□□□□ -1.5
Brca1P48754 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Brca1P48754 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.69□□□□□ -1.5
Brca1P48754 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.69□□□□□ -1.5
Brca1P48754 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Brca1P48754 Gm24166-201ENSMUST00000082724 135 ntBASIC5.69□□□□□ -1.5
Brca1P48754 Snora52-201ENSMUST00000082732 137 ntBASIC5.69□□□□□ -1.5
Brca1P48754 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.69□□□□□ -1.5
Brca1P48754 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Brca1P48754 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Brca1P48754 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.69□□□□□ -1.5
Brca1P48754 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Brca1P48754 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Brca1P48754 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Brca1P48754 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Brca1P48754 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Brca1P48754 Synpr-207ENSMUST00000223583 3362 ntBASIC5.69□□□□□ -1.5
Brca1P48754 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.69□□□□□ -1.5
Brca1P48754 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Brca1P48754 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Brca1P48754 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Brca1P48754 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Brca1P48754 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Brca1P48754 AC151904.4-201ENSMUST00000219868 1319 ntBASIC5.69□□□□□ -1.5
Brca1P48754 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.69□□□□□ -1.5
Brca1P48754 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Brca1P48754 Gm13232-201ENSMUST00000121816 632 ntBASIC5.69□□□□□ -1.5
Brca1P48754 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.69□□□□□ -1.5
Brca1P48754 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.69□□□□□ -1.5
Brca1P48754 Gm28304-201ENSMUST00000185977 312 ntBASIC5.69□□□□□ -1.5
Brca1P48754 Gm29256-201ENSMUST00000189094 312 ntBASIC5.69□□□□□ -1.5
Brca1P48754 Gm28484-201ENSMUST00000190606 312 ntBASIC5.69□□□□□ -1.5
Brca1P48754 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.69□□□□□ -1.5
Brca1P48754 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC5.69□□□□□ -1.5
Brca1P48754 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.69□□□□□ -1.5
Brca1P48754 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Brca1P48754 Snord22-201ENSMUST00000083153 126 ntBASIC5.69□□□□□ -1.5
Brca1P48754 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Brca1P48754 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.69□□□□□ -1.5
Brca1P48754 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Brca1P48754 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Brca1P48754 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC5.69□□□□□ -1.5
Brca1P48754 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.68□□□□□ -1.5
Brca1P48754 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Brca1P48754 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.68□□□□□ -1.5
Brca1P48754 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.68□□□□□ -1.5
Brca1P48754 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Brca1P48754 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Brca1P48754 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Brca1P48754 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.68□□□□□ -1.5
Brca1P48754 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Brca1P48754 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.68□□□□□ -1.5
Brca1P48754 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Brca1P48754 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.68□□□□□ -1.5
Brca1P48754 Gm24124-201ENSMUST00000104103 132 ntBASIC5.68□□□□□ -1.5
Brca1P48754 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.68□□□□□ -1.5
Brca1P48754 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms