Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm17953-201ENSMUST00000192061 667 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Gm7626-201ENSMUST00000195801 353 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Gm2314-201ENSMUST00000200391 586 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Gm43459-201ENSMUST00000202093 331 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC7.29□□□□□ -1.24
Rfx1P48377 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC7.29□□□□□ -1.24
Rfx1P48377 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC7.29□□□□□ -1.24
Rfx1P48377 CT030705.2-201ENSMUST00000225301 556 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Rfx1P48377 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Rfx1P48377 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Rfx1P48377 Gm6419-201ENSMUST00000097166 429 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Rfx1P48377 AC155234.1-201ENSMUST00000225610 2823 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Rfx1P48377 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC7.29□□□□□ -1.24
Rfx1P48377 Gm15583-201ENSMUST00000116191 3510 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Rfx1P48377 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Rfx1P48377 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Rfx1P48377 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Rfx1P48377 Nsd1-207ENSMUST00000224973 9905 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Rfx1P48377 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Rfx1P48377 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Rfx1P48377 Gm18954-201ENSMUST00000222200 1792 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Rfx1P48377 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Rfx1P48377 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Rfx1P48377 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 Gm43719-201ENSMUST00000200088 2199 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
Rfx1P48377 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Rfx1P48377 Gm13818-201ENSMUST00000119441 511 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC7.28□□□□□ -1.24
Rfx1P48377 Gm22701-201ENSMUST00000175371 291 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Rfx1P48377 Gm7952-201ENSMUST00000180540 984 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 Gm27428-201ENSMUST00000184289 110 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC7.28□□□□□ -1.24
Rfx1P48377 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Rfx1P48377 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Rfx1P48377 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC7.28□□□□□ -1.24
Rfx1P48377 Ighv1-30-201ENSMUST00000194082 349 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 Gm36985-201ENSMUST00000195595 379 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC7.28□□□□□ -1.24
Rfx1P48377 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC7.28□□□□□ -1.24
Rfx1P48377 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC7.28□□□□□ -1.24
Rfx1P48377 Gm19653-201ENSMUST00000204326 1039 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 Gm19761-201ENSMUST00000205372 391 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 Gm9652-201ENSMUST00000209345 163 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC7.28□□□□□ -1.24
Rfx1P48377 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC7.28□□□□□ -1.24
Rfx1P48377 AC110381.1-201ENSMUST00000218987 586 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC7.28□□□□□ -1.24
Rfx1P48377 AC163743.1-201ENSMUST00000224309 270 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 CT009711.2-201ENSMUST00000225352 934 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 AC122858.3-201ENSMUST00000226341 740 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 AC135292.2-201ENSMUST00000227559 367 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 AC156016.5-201ENSMUST00000228742 355 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Rfx1P48377 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Rfx1P48377 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Rfx1P48377 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Rfx1P48377 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Rfx1P48377 Gm14896-201ENSMUST00000121311 1351 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 AC155167.2-201ENSMUST00000226127 1945 ntBASIC7.28□□□□□ -1.24
Rfx1P48377 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
Rfx1P48377 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Rfx1P48377 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Rfx1P48377 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Rfx1P48377 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC7.28□□□□□ -1.24
Rfx1P48377 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Rfx1P48377 Gm8853-201ENSMUST00000198366 1344 ntBASIC7.27□□□□□ -1.24
Rfx1P48377 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
Rfx1P48377 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
Rfx1P48377 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC7.27□□□□□ -1.25
Rfx1P48377 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
Rfx1P48377 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Rfx1P48377 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Rfx1P48377 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
Rfx1P48377 Gm26002-201ENSMUST00000101915 107 ntBASIC7.27□□□□□ -1.25
Rfx1P48377 Gm25876-201ENSMUST00000104329 119 ntBASIC7.27□□□□□ -1.25
Rfx1P48377 Mir669d-2-201ENSMUST00000116854 86 ntBASIC7.27□□□□□ -1.25
Rfx1P48377 Gm13733-201ENSMUST00000117290 535 ntBASIC7.27□□□□□ -1.25
Rfx1P48377 Gm9311-201ENSMUST00000118042 1269 ntBASIC7.27□□□□□ -1.25
Rfx1P48377 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Rfx1P48377 Gm12535-201ENSMUST00000121025 484 ntBASIC7.27□□□□□ -1.25
Rfx1P48377 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC7.27□□□□□ -1.25
Rfx1P48377 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Rfx1P48377 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC7.27□□□□□ -1.25
Rfx1P48377 Gm22548-201ENSMUST00000174899 78 ntBASIC7.27□□□□□ -1.25
Rfx1P48377 Mir6769b-201ENSMUST00000184793 60 ntBASIC7.27□□□□□ -1.25
Rfx1P48377 Gm27919-201ENSMUST00000185163 107 ntBASIC7.27□□□□□ -1.25
Rfx1P48377 Gm18667-201ENSMUST00000186523 484 ntBASIC7.27□□□□□ -1.25
Rfx1P48377 Gm28594-201ENSMUST00000187022 661 ntBASIC7.27□□□□□ -1.25
Rfx1P48377 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC7.27□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms