Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 CR974429.1-201ENSMUST00000220877 827 ntBASIC6.81□□□□□ -1.32
Sox18P43680 AC135377.1-201ENSMUST00000223692 463 ntBASIC6.81□□□□□ -1.32
Sox18P43680 AC165155.1-201ENSMUST00000228932 445 ntBASIC6.81□□□□□ -1.32
Sox18P43680 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Sox18P43680 Snord68-201ENSMUST00000082516 86 ntBASIC6.81□□□□□ -1.32
Sox18P43680 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox18P43680 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox18P43680 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
Sox18P43680 AC122356.1-202ENSMUST00000227328 2758 ntBASIC6.81□□□□□ -1.32
Sox18P43680 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Sox18P43680 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
Sox18P43680 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
Sox18P43680 Gm7195-201ENSMUST00000190869 1707 ntBASIC6.81□□□□□ -1.32
Sox18P43680 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.81□□□□□ -1.32
Sox18P43680 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox18P43680 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox18P43680 Gm42866-201ENSMUST00000195919 3304 ntBASIC6.81□□□□□ -1.32
Sox18P43680 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox18P43680 CR974429.2-201ENSMUST00000221883 1696 ntBASIC6.81□□□□□ -1.32
Sox18P43680 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox18P43680 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 Gm37706-201ENSMUST00000195379 2765 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Sox18P43680 Gm18305-201ENSMUST00000216532 2128 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Sox18P43680 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Sox18P43680 Gm22426-201ENSMUST00000103811 96 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Gm23311-201ENSMUST00000104152 134 ntBASIC6.8□□□□□ -1.32
Sox18P43680 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Sox18P43680 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 Mir466i-201ENSMUST00000116924 121 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Gm12765-201ENSMUST00000117273 615 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Gm13141-201ENSMUST00000117417 456 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Gm10241-201ENSMUST00000117664 286 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Gm14790-201ENSMUST00000117760 1293 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Gm7429-201ENSMUST00000118664 348 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Gm13064-201ENSMUST00000119125 557 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Gm13259-201ENSMUST00000120792 456 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Gm13452-201ENSMUST00000120896 1097 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC6.8□□□□□ -1.32
Sox18P43680 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 Gm24687-201ENSMUST00000157758 241 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Gm24499-201ENSMUST00000158446 104 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.8□□□□□ -1.32
Sox18P43680 Gm3141-201ENSMUST00000168726 499 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Gm20702-201ENSMUST00000176181 460 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Gm21399-201ENSMUST00000180210 597 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox18P43680 Gm27849-201ENSMUST00000183673 125 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC6.8□□□□□ -1.32
Sox18P43680 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox18P43680 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox18P43680 Gm28098-201ENSMUST00000191361 699 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Ighv1-27-201ENSMUST00000194473 340 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC6.8□□□□□ -1.32
Sox18P43680 Gm18009-201ENSMUST00000203239 1016 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox18P43680 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.8□□□□□ -1.32
Sox18P43680 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 AC153912.2-201ENSMUST00000215840 2015 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC6.8□□□□□ -1.32
Sox18P43680 AC164567.2-201ENSMUST00000219363 445 ntBASIC6.8□□□□□ -1.32
Sox18P43680 AC154481.1-201ENSMUST00000223532 331 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Sox18P43680 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Sox18P43680 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Sox18P43680 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 Gm20302-201ENSMUST00000080671 275 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Sox18P43680 Gm23515-201ENSMUST00000082829 107 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
Sox18P43680 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox18P43680 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox18P43680 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Sox18P43680 Gm29113-201ENSMUST00000185991 3432 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC6.8□□□□□ -1.32
Sox18P43680 AC154141.1-201ENSMUST00000208403 4136 ntBASIC6.8□□□□□ -1.32
Sox18P43680 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Sox18P43680 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox18P43680 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox18P43680 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Sox18P43680 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms