Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm37114-201ENSMUST00000195065 1804 ntBASIC7.21□□□□□ -1.26
Col18a1P39061 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col18a1P39061 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Col18a1P39061 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col18a1P39061 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Col18a1P39061 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Col18a1P39061 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Col18a1P39061 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC7.21□□□□□ -1.26
Col18a1P39061 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col18a1P39061 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Col18a1P39061 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC7.21□□□□□ -1.26
Col18a1P39061 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.26
Col18a1P39061 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC7.21□□□□□ -1.26
Col18a1P39061 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col18a1P39061 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
Col18a1P39061 Gm11878-201ENSMUST00000117908 400 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 Gm13745-201ENSMUST00000121994 527 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col18a1P39061 Gm15790-201ENSMUST00000161109 1251 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col18a1P39061 Gm17164-201ENSMUST00000169013 506 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 Gm29240-201ENSMUST00000187248 286 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 Gm37503-201ENSMUST00000192088 319 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC7.2□□□□□ -1.26
Col18a1P39061 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC7.2□□□□□ -1.26
Col18a1P39061 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC7.2□□□□□ -1.26
Col18a1P39061 Gm4928-201ENSMUST00000219622 850 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 AC121599.1-201ENSMUST00000224276 449 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 AC144628.1-201ENSMUST00000227943 466 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col18a1P39061 Mir412-201ENSMUST00000083636 80 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col18a1P39061 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 Gm18508-201ENSMUST00000215790 1642 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 AC153143.1-201ENSMUST00000222966 1340 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 Gm42494-201ENSMUST00000196515 3051 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Col18a1P39061 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col18a1P39061 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col18a1P39061 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col18a1P39061 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col18a1P39061 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col18a1P39061 Gm44739-201ENSMUST00000205294 1426 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC7.2□□□□□ -1.26
Col18a1P39061 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col18a1P39061 Gm11270-201ENSMUST00000117685 471 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC7.2□□□□□ -1.26
Col18a1P39061 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col18a1P39061 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC7.2□□□□□ -1.26
Col18a1P39061 Gm24113-201ENSMUST00000157477 276 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 Mir1945-201ENSMUST00000157919 78 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col18a1P39061 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col18a1P39061 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col18a1P39061 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col18a1P39061 Gm8614-201ENSMUST00000182528 978 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 Trbv28-201ENSMUST00000192804 264 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 Gm45236-201ENSMUST00000208632 229 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col18a1P39061 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Col18a1P39061 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC7.2□□□□□ -1.26
Col18a1P39061 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col18a1P39061 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col18a1P39061 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col18a1P39061 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col18a1P39061 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col18a1P39061 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col18a1P39061 Gm36947-201ENSMUST00000194709 2249 ntBASIC7.2□□□□□ -1.26
Col18a1P39061 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col18a1P39061 Gm37916-201ENSMUST00000192153 2435 ntBASIC7.19□□□□□ -1.26
Col18a1P39061 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col18a1P39061 Gm42600-201ENSMUST00000202081 3588 ntBASIC7.19□□□□□ -1.26
Col18a1P39061 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC7.19□□□□□ -1.26
Col18a1P39061 Gm27013-202ENSMUST00000205067 1436 ntBASIC7.19□□□□□ -1.26
Col18a1P39061 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Col18a1P39061 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col18a1P39061 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col18a1P39061 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Col18a1P39061 Gm14037-201ENSMUST00000120576 313 ntBASIC7.19□□□□□ -1.26
Col18a1P39061 Gm15274-201ENSMUST00000131442 291 ntBASIC7.19□□□□□ -1.26
Col18a1P39061 Gm21979-201ENSMUST00000139887 291 ntBASIC7.19□□□□□ -1.26
Col18a1P39061 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC7.19□□□□□ -1.26
Col18a1P39061 Gm15259-201ENSMUST00000151262 291 ntBASIC7.19□□□□□ -1.26
Col18a1P39061 Gm16026-202ENSMUST00000159695 772 ntBASIC7.19□□□□□ -1.26
Col18a1P39061 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC7.19□□□□□ -1.26
Col18a1P39061 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC7.19□□□□□ -1.26
Col18a1P39061 Vmn1r82-202ENSMUST00000191002 918 ntBASIC7.19□□□□□ -1.26
Col18a1P39061 Gm6064-201ENSMUST00000203999 454 ntBASIC7.19□□□□□ -1.26
Col18a1P39061 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col18a1P39061 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Col18a1P39061 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC7.19□□□□□ -1.26
Col18a1P39061 AC102369.1-201ENSMUST00000218415 373 ntBASIC7.19□□□□□ -1.26
Col18a1P39061 AC122393.1-201ENSMUST00000226570 319 ntBASIC7.19□□□□□ -1.26
Col18a1P39061 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col18a1P39061 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Col18a1P39061 Gm42721-201ENSMUST00000197165 1523 ntBASIC7.19□□□□□ -1.26
Col18a1P39061 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms