Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Snora47-201ENSMUST00000157483 138 ntBASIC6.15□□□□□ -1.42
Usp4P35123 Gm23225-201ENSMUST00000158121 114 ntBASIC6.15□□□□□ -1.42
Usp4P35123 Gm16236-201ENSMUST00000159588 379 ntBASIC6.15□□□□□ -1.42
Usp4P35123 Gm17223-201ENSMUST00000171413 481 ntBASIC6.15□□□□□ -1.42
Usp4P35123 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC6.15□□□□□ -1.42
Usp4P35123 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC6.15□□□□□ -1.42
Usp4P35123 Gm24081-201ENSMUST00000175177 125 ntBASIC6.15□□□□□ -1.42
Usp4P35123 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Usp4P35123 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC6.15□□□□□ -1.42
Usp4P35123 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.15□□□□□ -1.42
Usp4P35123 Mir7211-201ENSMUST00000184071 63 ntBASIC6.15□□□□□ -1.42
Usp4P35123 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC6.15□□□□□ -1.42
Usp4P35123 Gm29263-201ENSMUST00000188718 463 ntBASIC6.15□□□□□ -1.42
Usp4P35123 Gm18407-201ENSMUST00000192126 790 ntBASIC6.15□□□□□ -1.42
Usp4P35123 Gm38281-201ENSMUST00000192301 315 ntBASIC6.15□□□□□ -1.42
Usp4P35123 Ighv1-3-201ENSMUST00000192764 302 ntBASIC6.15□□□□□ -1.42
Usp4P35123 Gm43392-201ENSMUST00000196560 434 ntBASIC6.15□□□□□ -1.42
Usp4P35123 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC6.15□□□□□ -1.42
Usp4P35123 Gm43708-201ENSMUST00000198857 961 ntBASIC6.15□□□□□ -1.42
Usp4P35123 Gm43501-201ENSMUST00000202513 107 ntBASIC6.15□□□□□ -1.42
Usp4P35123 Gm44118-201ENSMUST00000204665 229 ntBASIC6.15□□□□□ -1.42
Usp4P35123 Gm44919-201ENSMUST00000208587 1073 ntBASIC6.15□□□□□ -1.42
Usp4P35123 Gm45658-201ENSMUST00000209197 580 ntBASIC6.15□□□□□ -1.42
Usp4P35123 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC6.15□□□□□ -1.42
Usp4P35123 Gm19170-201ENSMUST00000212440 1084 ntBASIC6.15□□□□□ -1.42
Usp4P35123 AC153541.1-201ENSMUST00000213786 294 ntBASIC6.15□□□□□ -1.42
Usp4P35123 CT025526.1-201ENSMUST00000217327 267 ntBASIC6.15□□□□□ -1.42
Usp4P35123 Gm8264-201ENSMUST00000217801 465 ntBASIC6.15□□□□□ -1.42
Usp4P35123 AC116465.1-201ENSMUST00000220324 235 ntBASIC6.15□□□□□ -1.42
Usp4P35123 AC164426.1-201ENSMUST00000225745 929 ntBASIC6.15□□□□□ -1.42
Usp4P35123 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Usp4P35123 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Usp4P35123 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC6.15□□□□□ -1.42
Usp4P35123 Gm24029-201ENSMUST00000083928 143 ntBASIC6.15□□□□□ -1.42
Usp4P35123 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Usp4P35123 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Usp4P35123 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Usp4P35123 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.15□□□□□ -1.43
Usp4P35123 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.15□□□□□ -1.43
Usp4P35123 Slco6b1-202ENSMUST00000178359 1778 ntBASIC6.15□□□□□ -1.43
Usp4P35123 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6.15□□□□□ -1.43
Usp4P35123 Gm42440-201ENSMUST00000197906 2284 ntBASIC6.15□□□□□ -1.43
Usp4P35123 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Usp4P35123 Gm37780-201ENSMUST00000194117 1873 ntBASIC6.15□□□□□ -1.43
Usp4P35123 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Usp4P35123 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Usp4P35123 Gm37504-201ENSMUST00000192537 2374 ntBASIC6.15□□□□□ -1.43
Usp4P35123 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Usp4P35123 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Usp4P35123 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.14□□□□□ -1.43
Usp4P35123 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
Usp4P35123 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
Usp4P35123 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.14□□□□□ -1.43
Usp4P35123 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Usp4P35123 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usp4P35123 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Usp4P35123 Gm23739-201ENSMUST00000102295 108 ntBASIC6.14□□□□□ -1.43
Usp4P35123 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Usp4P35123 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Usp4P35123 Gm15021-201ENSMUST00000117832 742 ntBASIC6.14□□□□□ -1.43
Usp4P35123 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC6.14□□□□□ -1.43
Usp4P35123 Gm13484-201ENSMUST00000120738 412 ntBASIC6.14□□□□□ -1.43
Usp4P35123 Gm8317-201ENSMUST00000121261 471 ntBASIC6.14□□□□□ -1.43
Usp4P35123 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC6.14□□□□□ -1.43
Usp4P35123 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC6.14□□□□□ -1.43
Usp4P35123 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.14□□□□□ -1.43
Usp4P35123 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC6.14□□□□□ -1.43
Usp4P35123 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC6.14□□□□□ -1.43
Usp4P35123 Gm22793-201ENSMUST00000157227 330 ntBASIC6.14□□□□□ -1.43
Usp4P35123 Gm23279-201ENSMUST00000157912 97 ntBASIC6.14□□□□□ -1.43
Usp4P35123 Gm20480-201ENSMUST00000173953 250 ntBASIC6.14□□□□□ -1.43
Usp4P35123 Gm27512-201ENSMUST00000175328 126 ntBASIC6.14□□□□□ -1.43
Usp4P35123 Gm26923-201ENSMUST00000182615 996 ntBASIC6.14□□□□□ -1.43
Usp4P35123 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Usp4P35123 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.14□□□□□ -1.43
Usp4P35123 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC6.14□□□□□ -1.43
Usp4P35123 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Usp4P35123 Gm45689-201ENSMUST00000210522 133 ntBASIC6.14□□□□□ -1.43
Usp4P35123 AL603630.1-201ENSMUST00000214781 147 ntBASIC6.14□□□□□ -1.43
Usp4P35123 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC6.14□□□□□ -1.43
Usp4P35123 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Usp4P35123 AC112274.2-201ENSMUST00000218436 170 ntBASIC6.14□□□□□ -1.43
Usp4P35123 Gm4057-201ENSMUST00000221407 368 ntBASIC6.14□□□□□ -1.43
Usp4P35123 Gm2544-201ENSMUST00000222702 756 ntBASIC6.14□□□□□ -1.43
Usp4P35123 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Usp4P35123 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Usp4P35123 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Usp4P35123 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC6.14□□□□□ -1.43
Usp4P35123 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Usp4P35123 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usp4P35123 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Usp4P35123 Gm37833-201ENSMUST00000194342 3256 ntBASIC6.14□□□□□ -1.43
Usp4P35123 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Usp4P35123 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Usp4P35123 Gm45322-201ENSMUST00000211642 1361 ntBASIC6.14□□□□□ -1.43
Usp4P35123 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.14□□□□□ -1.43
Usp4P35123 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Usp4P35123 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usp4P35123 Gm38142-201ENSMUST00000194093 3555 ntBASIC6.14□□□□□ -1.43
Usp4P35123 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms