Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
Sdc1P18828 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC4.13□□□□□ -1.75
Sdc1P18828 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC4.13□□□□□ -1.75
Sdc1P18828 Gm8939-201ENSMUST00000192577 964 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Gm5285-201ENSMUST00000193089 666 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Gm37070-201ENSMUST00000193272 460 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Ighv1-21-201ENSMUST00000194856 351 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.13□□□□□ -1.75
Sdc1P18828 Gm42720-201ENSMUST00000196813 300 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Gm42625-201ENSMUST00000198611 922 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Gm4874-201ENSMUST00000203589 691 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Sdc1P18828 Gm19033-201ENSMUST00000208516 964 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Sdc1P18828 Gm45710-201ENSMUST00000212847 215 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Sdc1P18828 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC4.13□□□□□ -1.75
Sdc1P18828 AC124489.3-201ENSMUST00000224037 278 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Sdc1P18828 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sdc1P18828 Gm16415-201ENSMUST00000080097 489 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Gm10916-201ENSMUST00000080330 483 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Gm24454-201ENSMUST00000083349 132 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Mir99a-201ENSMUST00000083596 65 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Sdc1P18828 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sdc1P18828 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Sdc1P18828 Defa-ps18-201ENSMUST00000098889 371 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Sdc1P18828 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sdc1P18828 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sdc1P18828 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Sdc1P18828 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sdc1P18828 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Sdc1P18828 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Sdc1P18828 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Sdc1P18828 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Sdc1P18828 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Sdc1P18828 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm25593-201ENSMUST00000102272 96 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Sdc1P18828 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Sdc1P18828 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm15267-201ENSMUST00000120888 464 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 Gm13232-201ENSMUST00000121816 632 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Sdc1P18828 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm24441-201ENSMUST00000157235 281 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 Gm23179-201ENSMUST00000158693 304 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 Gm23149-201ENSMUST00000158837 230 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 Gm6434-201ENSMUST00000163316 372 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.12□□□□□ -1.75
Sdc1P18828 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 Gm10074-201ENSMUST00000174543 249 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 Gm21991-201ENSMUST00000180006 508 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 Gm27036-201ENSMUST00000182465 980 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm19002-201ENSMUST00000192649 1012 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 Gm38237-201ENSMUST00000193366 376 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Sdc1P18828 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC4.12□□□□□ -1.75
Sdc1P18828 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 AC102287.1-201ENSMUST00000211412 454 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 Gm31711-201ENSMUST00000220687 196 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm18592-201ENSMUST00000221529 276 ntBASIC4.12□□□□□ -1.75
Sdc1P18828 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Sdc1P18828 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC4.12□□□□□ -1.75
Sdc1P18828 AC154633.1-201ENSMUST00000223276 449 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms