Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.39□□□□□ -1.55
Cldn5O54942 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.39□□□□□ -1.55
Cldn5O54942 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Cldn5O54942 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Cldn5O54942 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Cldn5O54942 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Cldn5O54942 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Cldn5O54942 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cldn5O54942 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Cldn5O54942 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cldn5O54942 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cldn5O54942 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Cldn5O54942 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC5.38□□□□□ -1.55
Cldn5O54942 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Cldn5O54942 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cldn5O54942 Gm12131-201ENSMUST00000117479 359 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 Gm14125-202ENSMUST00000120921 756 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 Gm15530-201ENSMUST00000122206 555 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cldn5O54942 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 Gm27688-201ENSMUST00000183634 91 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cldn5O54942 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cldn5O54942 Ighv1-3-201ENSMUST00000192764 302 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 Gm44319-201ENSMUST00000196974 93 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC5.38□□□□□ -1.55
Cldn5O54942 Gm45731-201ENSMUST00000211988 1203 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 Gm5750-201ENSMUST00000218711 801 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.38□□□□□ -1.55
Cldn5O54942 AC133517.2-201ENSMUST00000226820 690 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cldn5O54942 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Cldn5O54942 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cldn5O54942 Snord15b-201ENSMUST00000083032 145 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 Gm25260-201ENSMUST00000083053 134 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 Gm22971-201ENSMUST00000083305 97 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 Gm22741-201ENSMUST00000083438 165 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cldn5O54942 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
Cldn5O54942 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.38□□□□□ -1.55
Cldn5O54942 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Cldn5O54942 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.38□□□□□ -1.55
Cldn5O54942 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cldn5O54942 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cldn5O54942 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cldn5O54942 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.37□□□□□ -1.55
Cldn5O54942 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.37□□□□□ -1.55
Cldn5O54942 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cldn5O54942 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Cldn5O54942 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cldn5O54942 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cldn5O54942 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Cldn5O54942 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Cldn5O54942 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Cldn5O54942 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cldn5O54942 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Cldn5O54942 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cldn5O54942 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cldn5O54942 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cldn5O54942 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cldn5O54942 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Cldn5O54942 Gm11486-201ENSMUST00000107322 478 ntBASIC5.37□□□□□ -1.55
Cldn5O54942 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cldn5O54942 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.37□□□□□ -1.55
Cldn5O54942 Gm25293-201ENSMUST00000122792 285 ntBASIC5.37□□□□□ -1.55
Cldn5O54942 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC5.37□□□□□ -1.55
Cldn5O54942 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.37□□□□□ -1.55
Cldn5O54942 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.37□□□□□ -1.55
Cldn5O54942 Gm25383-201ENSMUST00000157810 144 ntBASIC5.37□□□□□ -1.55
Cldn5O54942 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC5.37□□□□□ -1.55
Cldn5O54942 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC5.37□□□□□ -1.55
Cldn5O54942 Gm22852-201ENSMUST00000177899 101 ntBASIC5.37□□□□□ -1.55
Cldn5O54942 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5.37□□□□□ -1.55
Cldn5O54942 Gm27528-201ENSMUST00000183544 205 ntBASIC5.37□□□□□ -1.55
Cldn5O54942 Mir7006-201ENSMUST00000183624 69 ntBASIC5.37□□□□□ -1.55
Cldn5O54942 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cldn5O54942 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Cldn5O54942 Gm18800-202ENSMUST00000188688 1105 ntBASIC5.37□□□□□ -1.55
Cldn5O54942 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.37□□□□□ -1.55
Cldn5O54942 Mrgpra14-201ENSMUST00000189782 913 ntBASIC5.37□□□□□ -1.55
Cldn5O54942 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cldn5O54942 Gm9134-201ENSMUST00000193186 551 ntBASIC5.37□□□□□ -1.55
Cldn5O54942 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.37□□□□□ -1.55
Cldn5O54942 Gm43768-201ENSMUST00000198380 1258 ntBASIC5.37□□□□□ -1.55
Cldn5O54942 Gm17775-201ENSMUST00000198542 258 ntBASIC5.37□□□□□ -1.55
Cldn5O54942 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC5.37□□□□□ -1.55
Cldn5O54942 Gm20074-201ENSMUST00000208144 484 ntBASIC5.37□□□□□ -1.55
Cldn5O54942 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.37□□□□□ -1.55
Cldn5O54942 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cldn5O54942 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.37□□□□□ -1.55
Cldn5O54942 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 113.1 ms