Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm13311-201ENSMUST00000117863 379 ntBASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Gm6632-201ENSMUST00000168425 954 ntBASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Mir1957b-201ENSMUST00000184608 123 ntBASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Gm37492-201ENSMUST00000191948 376 ntBASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Gm37491-201ENSMUST00000192552 1111 ntBASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Gm10292-202ENSMUST00000193165 585 ntBASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Gm37636-201ENSMUST00000193583 359 ntBASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 AC142273.1-201ENSMUST00000213723 673 ntBASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 AC125190.2-201ENSMUST00000221160 497 ntBASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Zakit-201ENSMUST00000157677 308 ntBASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Gm37710-201ENSMUST00000193501 1274 ntBASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Gm3912-203ENSMUST00000211024 367 ntBASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 CR974592.1-201ENSMUST00000220422 574 ntBASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 AC154724.1-201ENSMUST00000225782 821 ntBASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 AC121997.2-201ENSMUST00000228095 2294 ntBASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Gm13932-201ENSMUST00000120873 610 ntBASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Gm17043-201ENSMUST00000164621 1283 ntBASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 AC120011.1-201ENSMUST00000202147 744 ntBASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Gm45651-201ENSMUST00000210857 335 ntBASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 CT030705.1-201ENSMUST00000223971 533 ntBASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 CT956049.1-201ENSMUST00000225671 763 ntBASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 AC131743.1-201ENSMUST00000222138 4024 ntBASIC9.23□□□□□ -0.93
Ccdc180J3QNE4 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Gm14909-201ENSMUST00000117853 351 ntBASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Gm13815-201ENSMUST00000119963 412 ntBASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Gm22343-201ENSMUST00000122648 286 ntBASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Gm23501-201ENSMUST00000157744 256 ntBASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Mir6975-201ENSMUST00000184879 61 ntBASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 AC159896.3-201ENSMUST00000215904 3835 ntBASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
Ccdc180J3QNE4 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Ccdc180J3QNE4 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Ccdc180J3QNE4 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Ccdc180J3QNE4 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Ccdc180J3QNE4 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Ccdc180J3QNE4 Gm16259-201ENSMUST00000145241 553 ntBASIC9.21□□□□□ -0.93
Ccdc180J3QNE4 Gm24477-201ENSMUST00000157438 103 ntBASIC9.21□□□□□ -0.93
Ccdc180J3QNE4 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Ccdc180J3QNE4 Gm28116-201ENSMUST00000189064 387 ntBASIC9.21□□□□□ -0.93
Ccdc180J3QNE4 AC157515.1-201ENSMUST00000220953 450 ntBASIC9.21□□□□□ -0.93
Ccdc180J3QNE4 AC162467.3-201ENSMUST00000219716 2172 ntBASIC9.21□□□□□ -0.94
Ccdc180J3QNE4 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.94
Ccdc180J3QNE4 AC162908.1-201ENSMUST00000219164 4563 ntBASIC9.21□□□□□ -0.94
Ccdc180J3QNE4 AC158938.1-201ENSMUST00000225372 6720 ntBASIC9.21□□□□□ -0.94
Ccdc180J3QNE4 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Ccdc180J3QNE4 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Ccdc180J3QNE4 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ccdc180J3QNE4 AC102847.2-201ENSMUST00000227799 2906 ntBASIC9.2□□□□□ -0.94
Ccdc180J3QNE4 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC9.2□□□□□ -0.94
Ccdc180J3QNE4 Gm24124-201ENSMUST00000104103 132 ntBASIC9.2□□□□□ -0.94
Ccdc180J3QNE4 Gm4852-201ENSMUST00000121202 729 ntBASIC9.2□□□□□ -0.94
Ccdc180J3QNE4 Gm18128-201ENSMUST00000172625 511 ntBASIC9.2□□□□□ -0.94
Ccdc180J3QNE4 Gm27883-201ENSMUST00000183941 102 ntBASIC9.2□□□□□ -0.94
Ccdc180J3QNE4 Gm18802-201ENSMUST00000186270 888 ntBASIC9.2□□□□□ -0.94
Ccdc180J3QNE4 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC9.2□□□□□ -0.94
Ccdc180J3QNE4 Gm5288-201ENSMUST00000198323 1119 ntBASIC9.2□□□□□ -0.94
Ccdc180J3QNE4 Gm7822-201ENSMUST00000222433 581 ntBASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms