Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm13193-201ENSMUST00000117275 225 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm15016-201ENSMUST00000117300 720 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm5793-201ENSMUST00000119393 630 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm12067-201ENSMUST00000119755 1148 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Amd-ps1-201ENSMUST00000120127 994 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm13743-201ENSMUST00000121486 724 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm22478-201ENSMUST00000122570 154 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm23762-201ENSMUST00000158348 106 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm23968-201ENSMUST00000175047 125 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm4845-201ENSMUST00000179202 562 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Mir8118-201ENSMUST00000183962 129 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm18698-201ENSMUST00000192327 668 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm37838-201ENSMUST00000194464 312 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Ighv1-21-201ENSMUST00000194856 351 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm9632-201ENSMUST00000195934 643 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm4742-201ENSMUST00000200261 771 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm45673-201ENSMUST00000210293 358 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm19936-201ENSMUST00000216414 838 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 AC102676.1-201ENSMUST00000228131 719 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm23054-201ENSMUST00000082804 162 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.59□□□□□ -1.51
Pcdh1F7BJK1 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Pcdh1F7BJK1 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.59□□□□□ -1.52
Pcdh1F7BJK1 Gm18879-201ENSMUST00000221187 1537 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm44045-201ENSMUST00000204906 2520 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Mir711-201ENSMUST00000102188 82 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm16400-201ENSMUST00000116523 1029 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm15216-201ENSMUST00000118058 277 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm13087-201ENSMUST00000118298 256 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm5601-201ENSMUST00000118909 972 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm15750-201ENSMUST00000120970 616 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm12399-201ENSMUST00000121475 446 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm4886-201ENSMUST00000121874 1176 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm6434-201ENSMUST00000163316 372 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm20690-201ENSMUST00000177341 315 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm9285-201ENSMUST00000177691 697 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm6900-201ENSMUST00000178971 342 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm27036-201ENSMUST00000182465 980 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms