Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Trim3Q9R1R2 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm37779-201ENSMUST00000194221 3380 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm15185-201ENSMUST00000117397 746 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm14790-201ENSMUST00000117760 1293 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm8595-201ENSMUST00000118250 630 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm15034-201ENSMUST00000120043 349 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm23229-201ENSMUST00000157297 105 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Mir3080-201ENSMUST00000175010 79 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm27266-201ENSMUST00000184521 123 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm2914-201ENSMUST00000186120 328 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm28967-201ENSMUST00000187351 281 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm28429-201ENSMUST00000188521 363 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm19035-201ENSMUST00000193299 1742 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm33601-201ENSMUST00000210001 961 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm21112-201ENSMUST00000212224 578 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm7760-201ENSMUST00000212265 578 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm7807-201ENSMUST00000212475 578 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 AC156950.1-201ENSMUST00000219604 456 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 AC153548.2-201ENSMUST00000219770 885 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Gm2099-201ENSMUST00000220979 412 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 CT030238.4-203ENSMUST00000227343 836 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Trim3Q9R1R2 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm43313-201ENSMUST00000201398 2235 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm42661-201ENSMUST00000202364 1442 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm42561-201ENSMUST00000202563 1442 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm25919-201ENSMUST00000104271 132 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm11313-201ENSMUST00000118779 432 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm7312-201ENSMUST00000118798 469 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm13887-201ENSMUST00000119009 344 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm13537-201ENSMUST00000120467 267 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm11677-201ENSMUST00000121349 977 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm12222-201ENSMUST00000121368 260 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Mir1963-201ENSMUST00000158594 59 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm17152-201ENSMUST00000172430 535 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm27820-201ENSMUST00000183628 175 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Mir7020-201ENSMUST00000183787 70 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Mir7087-201ENSMUST00000184840 70 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms