Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Mir697-201ENSMUST00000102316 109 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm14893-201ENSMUST00000117904 282 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm11878-201ENSMUST00000117908 400 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm7421-201ENSMUST00000119298 639 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm7365-201ENSMUST00000120877 639 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm25180-201ENSMUST00000157746 115 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm22534-201ENSMUST00000158173 104 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm16101-201ENSMUST00000160695 430 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm7244-201ENSMUST00000164658 455 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm20519-201ENSMUST00000173684 359 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm21809-201ENSMUST00000178495 468 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm17412-201ENSMUST00000179261 468 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm25873-201ENSMUST00000180317 107 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm17786-201ENSMUST00000182000 427 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm38373-201ENSMUST00000192042 288 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm36935-201ENSMUST00000192526 292 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm3511-201ENSMUST00000199823 204 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm7943-201ENSMUST00000212078 1034 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 AC152946.2-201ENSMUST00000219071 337 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm46231-201ENSMUST00000220152 314 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 CT030238.4-203ENSMUST00000227343 836 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 AC125405.2-201ENSMUST00000227862 383 ntBASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim39Q9ESN2 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm36962-201ENSMUST00000192114 1761 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm42508-201ENSMUST00000199972 3292 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm15105-201ENSMUST00000117777 204 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm13798-201ENSMUST00000118285 139 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm22025-201ENSMUST00000122734 302 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm26024-201ENSMUST00000158657 322 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm15974-201ENSMUST00000159103 531 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Trim39Q9ESN2 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm20701-201ENSMUST00000176082 347 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm18848-201ENSMUST00000182069 792 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Mir7011-201ENSMUST00000183768 73 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Mir6972-201ENSMUST00000184774 64 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm27596-201ENSMUST00000185061 83 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm28413-201ENSMUST00000189369 291 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm43147-201ENSMUST00000196944 542 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm44472-201ENSMUST00000204922 943 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm45149-201ENSMUST00000206459 2172 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm44923-201ENSMUST00000206673 85 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm2829-201ENSMUST00000213121 499 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 AC154296.2-201ENSMUST00000214696 545 ntBASIC6.29□□□□□ -1.4
Trim39Q9ESN2 AC153912.2-201ENSMUST00000215840 2015 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 98.6 ms