Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC7.8□□□□□ -1.16
Ube3bQ9ES34 AC139568.1-201ENSMUST00000222878 486 ntBASIC7.8□□□□□ -1.16
Ube3bQ9ES34 AC113031.1-201ENSMUST00000227400 432 ntBASIC7.8□□□□□ -1.16
Ube3bQ9ES34 CT030662.3-201ENSMUST00000228751 476 ntBASIC7.8□□□□□ -1.16
Ube3bQ9ES34 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ube3bQ9ES34 Gm7887-201ENSMUST00000056948 537 ntBASIC7.8□□□□□ -1.16
Ube3bQ9ES34 Gm5341-201ENSMUST00000058881 489 ntBASIC7.8□□□□□ -1.16
Ube3bQ9ES34 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Ube3bQ9ES34 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ube3bQ9ES34 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC7.8□□□□□ -1.16
Ube3bQ9ES34 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
Ube3bQ9ES34 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ube3bQ9ES34 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ube3bQ9ES34 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ube3bQ9ES34 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ube3bQ9ES34 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC7.8□□□□□ -1.16
Ube3bQ9ES34 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Ube3bQ9ES34 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Ube3bQ9ES34 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Ube3bQ9ES34 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm18313-201ENSMUST00000221036 1784 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ube3bQ9ES34 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm23485-201ENSMUST00000104181 155 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm11271-201ENSMUST00000116054 440 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm9850-201ENSMUST00000117916 227 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm13379-201ENSMUST00000118053 621 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm11252-201ENSMUST00000120572 939 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm24059-201ENSMUST00000157493 312 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm26162-201ENSMUST00000157793 132 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm17054-201ENSMUST00000169811 259 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm26557-201ENSMUST00000180756 493 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm29551-201ENSMUST00000190913 698 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm37135-201ENSMUST00000192652 534 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Trav3n-2-201ENSMUST00000197693 334 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Trav3d-2-201ENSMUST00000199874 334 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm8930-201ENSMUST00000201693 768 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm45700-201ENSMUST00000205866 347 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm2099-201ENSMUST00000220979 412 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 AC160114.2-201ENSMUST00000223021 300 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 AC165260.1-201ENSMUST00000224127 683 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm26442-201ENSMUST00000082588 153 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm18632-201ENSMUST00000222597 2087 ntBASIC7.79□□□□□ -1.16
Ube3bQ9ES34 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Gm8853-201ENSMUST00000198366 1344 ntBASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC7.78□□□□□ -1.16
Ube3bQ9ES34 AC139941.2-201ENSMUST00000221565 1824 ntBASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Gm23692-201ENSMUST00000101881 160 ntBASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Gm6923-201ENSMUST00000118343 406 ntBASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Gm15765-201ENSMUST00000118407 910 ntBASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Gm25184-201ENSMUST00000157753 163 ntBASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Gm23164-201ENSMUST00000175084 111 ntBASIC7.78□□□□□ -1.16
Ube3bQ9ES34 n-R5s109-201ENSMUST00000179195 119 ntBASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Gm27853-201ENSMUST00000184176 250 ntBASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Mir6337-201ENSMUST00000184194 105 ntBASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Gm37492-201ENSMUST00000191948 376 ntBASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Gm37961-201ENSMUST00000192729 299 ntBASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC7.78□□□□□ -1.16
Ube3bQ9ES34 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ube3bQ9ES34 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms