Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Gm19113-201ENSMUST00000217552 1828 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Gm37470-201ENSMUST00000193378 2798 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Gm42600-201ENSMUST00000202081 3588 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Gm22326-201ENSMUST00000158897 351 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Gm10087-201ENSMUST00000167650 330 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Gm29161-201ENSMUST00000188250 699 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Gm29664-201ENSMUST00000191125 463 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Gm37882-201ENSMUST00000195254 196 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Gm43794-201ENSMUST00000200971 692 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Gm44048-201ENSMUST00000204531 361 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Gm44074-201ENSMUST00000204562 337 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Gm20368-201ENSMUST00000220716 301 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 AC153794.2-201ENSMUST00000222650 550 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 AV026068-237ENSMUST00000226075 572 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Gm25139-201ENSMUST00000083247 210 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Mir30b-201ENSMUST00000083542 96 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Olfr878-201ENSMUST00000086061 1065 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Gm9700-201ENSMUST00000193786 1617 ntBASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Cdc40Q9DC48 Smc5-206ENSMUST00000226111 3265 ntBASIC4.85□□□□□ -1.63
Cdc40Q9DC48 AC154640.4-201ENSMUST00000226647 4640 ntBASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Mir292-201ENSMUST00000104847 82 ntBASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Gm15766-201ENSMUST00000118025 813 ntBASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Gm11550-201ENSMUST00000118210 699 ntBASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Gm8256-201ENSMUST00000169178 453 ntBASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Mir6986-201ENSMUST00000184483 58 ntBASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Gm19029-201ENSMUST00000189923 564 ntBASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Gm18717-201ENSMUST00000192744 1241 ntBASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Gm37070-201ENSMUST00000193272 460 ntBASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Gm42502-201ENSMUST00000198550 1089 ntBASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Gm43895-201ENSMUST00000203219 855 ntBASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 AC134439.1-201ENSMUST00000220923 600 ntBASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Cdc40Q9DC48 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms