Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Gm25293-201ENSMUST00000122792 285 ntBASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Gm26404-201ENSMUST00000158498 109 ntBASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Mir6343-201ENSMUST00000183584 84 ntBASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Mrgpra14-201ENSMUST00000189782 913 ntBASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Rpa3Q9CQ71 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm14520-201ENSMUST00000119258 387 ntBASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm4853-201ENSMUST00000119359 394 ntBASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm25906-201ENSMUST00000158489 126 ntBASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm5139-201ENSMUST00000175943 249 ntBASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm27528-201ENSMUST00000183544 205 ntBASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Mir7012-201ENSMUST00000183900 64 ntBASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm6717-201ENSMUST00000185549 838 ntBASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm9442-201ENSMUST00000194242 319 ntBASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm43408-201ENSMUST00000198263 440 ntBASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm42428-201ENSMUST00000198677 302 ntBASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm2011-203ENSMUST00000203750 435 ntBASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm45276-201ENSMUST00000209549 1086 ntBASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm22741-201ENSMUST00000083438 165 ntBASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm42440-201ENSMUST00000197906 2284 ntBASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Rpa3Q9CQ71 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rpa3Q9CQ71 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.3□□□□□ -1.56
Rpa3Q9CQ71 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Rpa3Q9CQ71 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.3□□□□□ -1.56
Rpa3Q9CQ71 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rpa3Q9CQ71 Mir711-201ENSMUST00000102188 82 ntBASIC5.3□□□□□ -1.56
Rpa3Q9CQ71 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rpa3Q9CQ71 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Rpa3Q9CQ71 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rpa3Q9CQ71 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.3□□□□□ -1.56
Rpa3Q9CQ71 Gm12245-201ENSMUST00000117266 357 ntBASIC5.3□□□□□ -1.56
Rpa3Q9CQ71 Gm15357-201ENSMUST00000119160 285 ntBASIC5.3□□□□□ -1.56
Rpa3Q9CQ71 Gm14695-201ENSMUST00000121721 282 ntBASIC5.3□□□□□ -1.56
Rpa3Q9CQ71 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Rpa3Q9CQ71 Gm25824-201ENSMUST00000157092 121 ntBASIC5.3□□□□□ -1.56
Rpa3Q9CQ71 Gm23537-201ENSMUST00000157536 330 ntBASIC5.3□□□□□ -1.56
Rpa3Q9CQ71 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.3□□□□□ -1.56
Rpa3Q9CQ71 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rpa3Q9CQ71 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms