Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC4.84□□□□□ -1.63
Use1Q9CQ56 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Use1Q9CQ56 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Use1Q9CQ56 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Use1Q9CQ56 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Use1Q9CQ56 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Use1Q9CQ56 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.84□□□□□ -1.64
Use1Q9CQ56 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.84□□□□□ -1.64
Use1Q9CQ56 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Use1Q9CQ56 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Use1Q9CQ56 Gm18852-201ENSMUST00000184149 3593 ntBASIC4.83□□□□□ -1.64
Use1Q9CQ56 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
Use1Q9CQ56 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.83□□□□□ -1.64
Use1Q9CQ56 Gm15394-201ENSMUST00000119656 1308 ntBASIC4.83□□□□□ -1.64
Use1Q9CQ56 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Use1Q9CQ56 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Use1Q9CQ56 Gm13579-201ENSMUST00000118519 517 ntBASIC4.83□□□□□ -1.64
Use1Q9CQ56 Gm11313-201ENSMUST00000118779 432 ntBASIC4.83□□□□□ -1.64
Use1Q9CQ56 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.83□□□□□ -1.64
Use1Q9CQ56 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Use1Q9CQ56 Gm8256-201ENSMUST00000169178 453 ntBASIC4.83□□□□□ -1.64
Use1Q9CQ56 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Use1Q9CQ56 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Use1Q9CQ56 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC4.83□□□□□ -1.64
Use1Q9CQ56 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Use1Q9CQ56 Gm9443-201ENSMUST00000188406 816 ntBASIC4.83□□□□□ -1.64
Use1Q9CQ56 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Use1Q9CQ56 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Use1Q9CQ56 Gm4321-201ENSMUST00000200520 442 ntBASIC4.83□□□□□ -1.64
Use1Q9CQ56 Gm43501-201ENSMUST00000202513 107 ntBASIC4.83□□□□□ -1.64
Use1Q9CQ56 Gm18011-201ENSMUST00000203717 565 ntBASIC4.83□□□□□ -1.64
Use1Q9CQ56 Gm44820-201ENSMUST00000207420 396 ntBASIC4.83□□□□□ -1.64
Use1Q9CQ56 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC4.83□□□□□ -1.64
Use1Q9CQ56 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC4.83□□□□□ -1.64
Use1Q9CQ56 Gm45422-201ENSMUST00000211476 246 ntBASIC4.83□□□□□ -1.64
Use1Q9CQ56 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC4.83□□□□□ -1.64
Use1Q9CQ56 Gm19936-201ENSMUST00000216414 838 ntBASIC4.83□□□□□ -1.64
Use1Q9CQ56 Gm6477-201ENSMUST00000217098 764 ntBASIC4.83□□□□□ -1.64
Use1Q9CQ56 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC4.83□□□□□ -1.64
Use1Q9CQ56 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC4.83□□□□□ -1.64
Use1Q9CQ56 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Use1Q9CQ56 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.83□□□□□ -1.64
Use1Q9CQ56 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC4.83□□□□□ -1.64
Use1Q9CQ56 Gm272-201ENSMUST00000222073 919 ntBASIC4.83□□□□□ -1.64
Use1Q9CQ56 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Use1Q9CQ56 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Use1Q9CQ56 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Use1Q9CQ56 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Use1Q9CQ56 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Use1Q9CQ56 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.83□□□□□ -1.64
Use1Q9CQ56 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.83□□□□□ -1.64
Use1Q9CQ56 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Use1Q9CQ56 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.83□□□□□ -1.64
Use1Q9CQ56 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Use1Q9CQ56 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm7416-201ENSMUST00000117448 1487 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Use1Q9CQ56 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Use1Q9CQ56 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm24350-201ENSMUST00000104163 133 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Use1Q9CQ56 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm14385-201ENSMUST00000116315 876 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm11825-201ENSMUST00000120710 736 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm17014-201ENSMUST00000120765 168 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm25176-201ENSMUST00000122640 125 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm6542-201ENSMUST00000153606 772 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm26046-201ENSMUST00000157312 166 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm23965-201ENSMUST00000157969 142 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC4.82□□□□□ -1.64
Use1Q9CQ56 Mir6539-201ENSMUST00000183732 110 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Mir6989-201ENSMUST00000184812 65 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm28353-201ENSMUST00000186482 570 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm21139-201ENSMUST00000186594 877 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm28533-201ENSMUST00000186741 570 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm6543-201ENSMUST00000197353 808 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm43382-201ENSMUST00000198954 838 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 LOC665443-201ENSMUST00000212284 796 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 AC140209.1-204ENSMUST00000226736 739 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 AC080021.1-201ENSMUST00000228104 700 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 AC164295.2-201ENSMUST00000228539 757 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 n-R5s204-201ENSMUST00000082972 119 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm25818-201ENSMUST00000083282 164 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm42436-201ENSMUST00000198804 3656 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Use1Q9CQ56 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC4.82□□□□□ -1.64
Use1Q9CQ56 AC170999.1-201ENSMUST00000226359 1585 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Use1Q9CQ56 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.82□□□□□ -1.64
Use1Q9CQ56 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms