Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm43611-201ENSMUST00000196656 4352 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm44530-201ENSMUST00000207920 3559 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm18796-201ENSMUST00000190440 1767 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm42534-201ENSMUST00000196063 1754 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Pramel-201ENSMUST00000118979 1383 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Ear-ps2-201ENSMUST00000100689 466 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm26340-201ENSMUST00000102365 99 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm12442-201ENSMUST00000118372 338 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm14783-201ENSMUST00000118900 663 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm14919-201ENSMUST00000120839 390 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm14784-201ENSMUST00000121604 663 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm23591-201ENSMUST00000157663 286 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm21737-201ENSMUST00000178112 664 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm20874-201ENSMUST00000178356 663 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm21744-201ENSMUST00000178403 662 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm20901-201ENSMUST00000180177 664 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm6717-201ENSMUST00000185549 838 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm28090-201ENSMUST00000189458 664 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm21647-201ENSMUST00000189755 664 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Trbv22-201ENSMUST00000191697 291 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Ighv1-30-201ENSMUST00000194082 349 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm37353-201ENSMUST00000194497 313 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm43345-201ENSMUST00000199484 269 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm43631-201ENSMUST00000202011 369 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 CT009713.9-201ENSMUST00000223604 389 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 CT009515.3-201ENSMUST00000226509 671 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Mir194-1-201ENSMUST00000083647 67 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm44220-201ENSMUST00000203784 2487 ntBASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Trim11Q99PQ2 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Trim11Q99PQ2 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm14382-201ENSMUST00000117374 437 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm7058-201ENSMUST00000119209 902 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm13818-201ENSMUST00000119441 511 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm16445-201ENSMUST00000120399 714 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm5646-201ENSMUST00000120568 714 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm12804-201ENSMUST00000121030 999 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Gm12399-201ENSMUST00000121475 446 ntBASIC7.08□□□□□ -1.28
Trim11Q99PQ2 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms