Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.36□□□□□ -1.55
Msh4Q99MT2 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.36□□□□□ -1.55
Msh4Q99MT2 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
Msh4Q99MT2 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Msh4Q99MT2 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Msh4Q99MT2 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Msh4Q99MT2 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm25313-201ENSMUST00000101817 116 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm4853-201ENSMUST00000119359 394 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm8430-201ENSMUST00000119780 471 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm6175-201ENSMUST00000121351 400 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm12732-201ENSMUST00000121688 180 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm12327-201ENSMUST00000121729 1168 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm15141-201ENSMUST00000121860 729 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm26069-201ENSMUST00000157497 277 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm26170-201ENSMUST00000158419 148 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm23287-201ENSMUST00000179427 116 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm23143-201ENSMUST00000180137 116 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm18802-201ENSMUST00000186270 888 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm19086-201ENSMUST00000190772 665 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm37098-201ENSMUST00000192290 244 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm37719-201ENSMUST00000194615 292 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm9245-201ENSMUST00000200528 983 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Trav12-4-201ENSMUST00000200663 271 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm4874-201ENSMUST00000203589 691 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm43992-201ENSMUST00000204358 197 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm2961-201ENSMUST00000211074 772 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 AC154296.3-201ENSMUST00000214427 712 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 AC154838.1-201ENSMUST00000228944 911 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm24871-201ENSMUST00000083099 116 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Rnu5g-201ENSMUST00000093721 116 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.35□□□□□ -1.55
Msh4Q99MT2 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Msh4Q99MT2 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Msh4Q99MT2 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC5.34□□□□□ -1.55
Msh4Q99MT2 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Msh4Q99MT2 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Msh4Q99MT2 Gm7416-201ENSMUST00000117448 1487 ntBASIC5.34□□□□□ -1.55
Msh4Q99MT2 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC5.34□□□□□ -1.55
Msh4Q99MT2 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Msh4Q99MT2 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Msh4Q99MT2 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Msh4Q99MT2 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Msh4Q99MT2 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.34□□□□□ -1.55
Msh4Q99MT2 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Msh4Q99MT2 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Msh4Q99MT2 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Msh4Q99MT2 Gm9597-202ENSMUST00000227632 1387 ntBASIC5.34□□□□□ -1.55
Msh4Q99MT2 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Msh4Q99MT2 Mir466j-201ENSMUST00000116876 122 ntBASIC5.34□□□□□ -1.55
Msh4Q99MT2 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.34□□□□□ -1.55
Msh4Q99MT2 Gm4989-201ENSMUST00000118711 749 ntBASIC5.34□□□□□ -1.55
Msh4Q99MT2 Gm13788-201ENSMUST00000120767 601 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms