Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Clp1Q99LI9 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm15113-201ENSMUST00000119280 836 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm11522-201ENSMUST00000120533 176 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm14766-201ENSMUST00000121689 367 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm8061-201ENSMUST00000122380 350 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 n-R5s19-201ENSMUST00000122793 120 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm22076-201ENSMUST00000158601 84 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm5527-201ENSMUST00000179821 642 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm8524-201ENSMUST00000186232 379 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm3841-201ENSMUST00000191399 451 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm37609-201ENSMUST00000191778 678 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm6631-201ENSMUST00000193699 559 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm42522-201ENSMUST00000196071 255 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm18672-201ENSMUST00000208035 270 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC6.83□□□□□ -1.32
Clp1Q99LI9 AC134334.1-201ENSMUST00000214277 255 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 AC159619.2-201ENSMUST00000222924 401 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 AC174797.2-203ENSMUST00000224017 716 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm26163-201ENSMUST00000083792 178 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.83□□□□□ -1.32
Clp1Q99LI9 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clp1Q99LI9 Gm43876-201ENSMUST00000203831 3229 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Clp1Q99LI9 AC153729.1-201ENSMUST00000214055 2562 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clp1Q99LI9 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clp1Q99LI9 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clp1Q99LI9 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clp1Q99LI9 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clp1Q99LI9 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clp1Q99LI9 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Gm22952-201ENSMUST00000116720 120 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Gm12193-201ENSMUST00000117250 379 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Gm8424-201ENSMUST00000117716 988 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Gm12268-201ENSMUST00000118398 442 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Gm14837-201ENSMUST00000119688 206 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Gm15158-201ENSMUST00000120577 570 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Gm11852-201ENSMUST00000120806 222 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Gm12819-201ENSMUST00000122223 629 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Mup-ps12-201ENSMUST00000126217 549 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Gm23031-201ENSMUST00000157998 119 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Gm25363-201ENSMUST00000158850 245 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Clp1Q99LI9 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Gm26381-201ENSMUST00000174895 92 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Gm22776-201ENSMUST00000178634 94 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Gm23767-201ENSMUST00000179278 94 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clp1Q99LI9 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clp1Q99LI9 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clp1Q99LI9 Gm38221-201ENSMUST00000195146 365 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Gm43105-201ENSMUST00000202987 459 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC6.82□□□□□ -1.32
Clp1Q99LI9 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC6.82□□□□□ -1.32
Clp1Q99LI9 Gm45690-201ENSMUST00000210775 246 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms