Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Lsm1Q8VC85 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Lsm1Q8VC85 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Lsm1Q8VC85 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Lsm1Q8VC85 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Lsm1Q8VC85 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Lsm1Q8VC85 Gm38368-201ENSMUST00000193181 1335 ntBASIC4.93□□□□□ -1.62
Lsm1Q8VC85 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Lsm1Q8VC85 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.93□□□□□ -1.62
Lsm1Q8VC85 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC4.93□□□□□ -1.62
Lsm1Q8VC85 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Lsm1Q8VC85 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Lsm1Q8VC85 Gm36963-201ENSMUST00000193506 2324 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Gm42661-201ENSMUST00000202364 1442 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Gm42561-201ENSMUST00000202563 1442 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Gm13245-201ENSMUST00000119646 260 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Mup-ps19-201ENSMUST00000120390 519 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Klra13-ps-201ENSMUST00000125813 802 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Gm9428-201ENSMUST00000127214 769 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Mir1970-201ENSMUST00000157839 104 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Gm26404-201ENSMUST00000158498 109 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Gm10784-201ENSMUST00000178715 238 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Mir6539-201ENSMUST00000183732 110 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Mir7220-201ENSMUST00000183978 60 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Gm38097-201ENSMUST00000192936 439 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Gm9480-201ENSMUST00000198038 616 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Gm18705-201ENSMUST00000215985 913 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 AC140209.1-204ENSMUST00000226736 739 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 AC163646.1-201ENSMUST00000227704 397 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 AC154616.2-201ENSMUST00000227978 398 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Mir331-201ENSMUST00000083673 96 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.92□□□□□ -1.62
Lsm1Q8VC85 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Lsm1Q8VC85 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm37607-201ENSMUST00000194925 2623 ntBASIC4.91□□□□□ -1.62
Lsm1Q8VC85 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm11975-201ENSMUST00000118772 481 ntBASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm14335-201ENSMUST00000119165 810 ntBASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm9435-201ENSMUST00000120379 877 ntBASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm17014-201ENSMUST00000120765 168 ntBASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm23318-201ENSMUST00000158000 108 ntBASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm24295-201ENSMUST00000158298 131 ntBASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm25363-201ENSMUST00000158850 245 ntBASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm6673-201ENSMUST00000166114 700 ntBASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm5139-201ENSMUST00000175943 249 ntBASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Mir6418-201ENSMUST00000185075 115 ntBASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm28604-201ENSMUST00000186629 484 ntBASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lsm1Q8VC85 Gm28566-201ENSMUST00000186714 484 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms