Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Gm12788-201ENSMUST00000119090 308 ntBASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Gm14375-201ENSMUST00000119490 855 ntBASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Gm14472-201ENSMUST00000119815 282 ntBASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Gm13998-201ENSMUST00000120952 335 ntBASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Gm8317-201ENSMUST00000121261 471 ntBASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Gm8761-201ENSMUST00000121507 955 ntBASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Gm25117-201ENSMUST00000157194 144 ntBASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Gm22378-201ENSMUST00000157481 111 ntBASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Gm23806-201ENSMUST00000175157 109 ntBASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Gm25037-201ENSMUST00000175418 110 ntBASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Gm29509-201ENSMUST00000185716 321 ntBASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Gm5066-201ENSMUST00000188479 822 ntBASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Gm43892-201ENSMUST00000204373 265 ntBASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Gm44538-201ENSMUST00000205615 348 ntBASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Gm18467-201ENSMUST00000208805 434 ntBASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 AC134439.1-201ENSMUST00000220923 600 ntBASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 AC126043.1-201ENSMUST00000221304 1141 ntBASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 AC174797.4-201ENSMUST00000225510 347 ntBASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Ankrd28-204ENSMUST00000227089 3522 ntBASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc9Q8VC31 Gm42729-201ENSMUST00000201770 2930 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm37900-201ENSMUST00000195510 3805 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm15828-201ENSMUST00000119911 522 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm12222-201ENSMUST00000121368 260 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm13232-201ENSMUST00000121816 632 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm10177-201ENSMUST00000160052 444 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Mir3473g-201ENSMUST00000183494 136 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm29519-201ENSMUST00000186994 398 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm29556-201ENSMUST00000187591 696 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm28080-201ENSMUST00000188552 722 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm21524-201ENSMUST00000190499 696 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm21715-201ENSMUST00000191056 694 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm37475-201ENSMUST00000193107 1015 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm37784-201ENSMUST00000193233 189 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm18864-201ENSMUST00000194518 1051 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm31306-201ENSMUST00000197517 508 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm44332-201ENSMUST00000203712 433 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm18839-201ENSMUST00000204292 670 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 AC165292.1-201ENSMUST00000215218 620 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 AC157085.1-201ENSMUST00000216343 162 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 AC118733.1-201ENSMUST00000217387 1217 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm2099-201ENSMUST00000220979 412 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 AC159622.1-201ENSMUST00000221004 554 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 AC165283.1-201ENSMUST00000223390 307 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 AC131745.1-201ENSMUST00000223660 330 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 AC173482.2-201ENSMUST00000224044 750 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 AC154795.1-201ENSMUST00000225611 364 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 AC117202.1-201ENSMUST00000227007 445 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 AC122397.2-201ENSMUST00000227422 686 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Gm8724-201ENSMUST00000081668 483 ntBASIC6.32□□□□□ -1.4
Ccdc9Q8VC31 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms