Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm12656-201ENSMUST00000118149 577 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm15660-201ENSMUST00000118997 478 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm12936-201ENSMUST00000121439 301 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm15877-201ENSMUST00000121897 964 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC5.72□□□□□ -1.49
CopaQ8CIE6 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm28943-201ENSMUST00000186187 615 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm28736-201ENSMUST00000186257 615 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm29124-201ENSMUST00000186576 452 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm29401-201ENSMUST00000186690 615 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm29178-204ENSMUST00000186784 615 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm28589-201ENSMUST00000186991 615 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm28936-201ENSMUST00000187153 615 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm29121-201ENSMUST00000187611 615 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm28243-201ENSMUST00000187801 615 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm28844-202ENSMUST00000187977 615 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm29058-201ENSMUST00000189510 615 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm29624-201ENSMUST00000190018 615 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm28780-201ENSMUST00000190223 615 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm28969-211ENSMUST00000190992 615 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm28990-207ENSMUST00000191219 615 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm36468-201ENSMUST00000192119 615 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm31572-201ENSMUST00000193341 615 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm30175-201ENSMUST00000194173 615 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm30858-201ENSMUST00000195516 615 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm31520-201ENSMUST00000203048 733 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Clec2j-202ENSMUST00000203658 606 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm18205-201ENSMUST00000209215 841 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm45474-201ENSMUST00000209471 408 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm10709-201ENSMUST00000213318 480 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm8137-201ENSMUST00000218997 463 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 AC163621.2-201ENSMUST00000222229 682 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 CT009733.1-203ENSMUST00000224033 451 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 AC132833.3-201ENSMUST00000227472 866 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CopaQ8CIE6 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
CopaQ8CIE6 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm7680-201ENSMUST00000216198 1348 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CopaQ8CIE6 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.72□□□□□ -1.49
CopaQ8CIE6 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CopaQ8CIE6 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.71□□□□□ -1.49
CopaQ8CIE6 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
CopaQ8CIE6 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
CopaQ8CIE6 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CopaQ8CIE6 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.71□□□□□ -1.49
CopaQ8CIE6 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.71□□□□□ -1.49
CopaQ8CIE6 Gm42852-201ENSMUST00000202649 1379 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CopaQ8CIE6 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CopaQ8CIE6 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm8569-201ENSMUST00000117630 647 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm11781-201ENSMUST00000118328 472 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm3943-201ENSMUST00000118606 718 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm11510-201ENSMUST00000120278 347 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm11369-201ENSMUST00000120812 318 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm13533-201ENSMUST00000121104 177 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm14589-201ENSMUST00000121640 727 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC5.71□□□□□ -1.5
CopaQ8CIE6 Mir1970-201ENSMUST00000157839 104 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm25489-201ENSMUST00000158727 141 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm16285-201ENSMUST00000162999 347 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm26993-201ENSMUST00000182766 789 ntBASIC5.71□□□□□ -1.5
CopaQ8CIE6 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC5.71□□□□□ -1.5
CopaQ8CIE6 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms