Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm43308-201ENSMUST00000197236 373 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm44074-201ENSMUST00000204562 337 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 CT030254.3-201ENSMUST00000225959 1231 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 AC154239.2-201ENSMUST00000227859 233 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 n-R5s46-201ENSMUST00000083960 116 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm42736-201ENSMUST00000200723 1353 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Mir669p-2-201ENSMUST00000103868 87 ntBASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Mir669p-1-201ENSMUST00000103884 87 ntBASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Gm13579-201ENSMUST00000118519 517 ntBASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Mup-ps13-201ENSMUST00000120662 545 ntBASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Mup-ps1-201ENSMUST00000120720 544 ntBASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Gm16471-201ENSMUST00000121940 618 ntBASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Gm26489-201ENSMUST00000157880 264 ntBASIC6.5□□□□□ -1.37
Brf1Q8CFK2 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Gm44370-201ENSMUST00000175436 112 ntBASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Gm28885-201ENSMUST00000185615 563 ntBASIC6.5□□□□□ -1.37
Brf1Q8CFK2 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Gm7688-201ENSMUST00000212857 337 ntBASIC6.5□□□□□ -1.37
Brf1Q8CFK2 AC164164.2-201ENSMUST00000221809 785 ntBASIC6.5□□□□□ -1.37
Brf1Q8CFK2 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 AC160980.2-201ENSMUST00000225131 949 ntBASIC6.5□□□□□ -1.37
Brf1Q8CFK2 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Gm19131-202ENSMUST00000203464 3208 ntBASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Gm42436-201ENSMUST00000198804 3656 ntBASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Gm42645-201ENSMUST00000201573 1627 ntBASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Gm43333-201ENSMUST00000198340 2262 ntBASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Brf1Q8CFK2 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm42702-201ENSMUST00000199515 4217 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm37140-201ENSMUST00000192914 1684 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm15828-201ENSMUST00000119911 522 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm14739-201ENSMUST00000120424 802 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm13533-201ENSMUST00000121104 177 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm25669-201ENSMUST00000157699 112 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm23387-201ENSMUST00000158586 107 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms