Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 CT009734.1-201ENSMUST00000227657 1687 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Gm15227-201ENSMUST00000121844 399 ntBASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Gm42619-201ENSMUST00000197564 1136 ntBASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Gm33952-201ENSMUST00000197795 408 ntBASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Gm9173-201ENSMUST00000198054 400 ntBASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Gm9332-201ENSMUST00000198431 730 ntBASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Gm32536-201ENSMUST00000205209 445 ntBASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Gm21041-201ENSMUST00000214829 823 ntBASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc28aQ8CEI3 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Gm15390-201ENSMUST00000120323 738 ntBASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Gm23430-201ENSMUST00000122490 314 ntBASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Gm22343-201ENSMUST00000122648 286 ntBASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Gm16102-201ENSMUST00000160955 420 ntBASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Gm7609-204ENSMUST00000161424 461 ntBASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Gm38131-201ENSMUST00000192449 430 ntBASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Gm6906-201ENSMUST00000218014 569 ntBASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Gm5045-201ENSMUST00000027054 810 ntBASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Gm10221-201ENSMUST00000088299 309 ntBASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28aQ8CEI3 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms