Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm16290-201ENSMUST00000161175 474 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm17054-201ENSMUST00000169811 259 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm25244-201ENSMUST00000178089 132 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm24465-201ENSMUST00000178398 107 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm27640-201ENSMUST00000184580 147 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm29509-201ENSMUST00000185716 321 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Ighv1-79-201ENSMUST00000200152 350 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm18258-201ENSMUST00000210413 542 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm18620-201ENSMUST00000222295 324 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 CT030645.2-201ENSMUST00000224321 1012 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 AC166574.3-201ENSMUST00000226725 367 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm5582-201ENSMUST00000075251 522 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 AC168056.3-201ENSMUST00000225395 2540 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm24275-201ENSMUST00000116780 146 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm23988-201ENSMUST00000117034 122 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm13870-201ENSMUST00000117214 1023 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm26023-201ENSMUST00000122722 313 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm9428-201ENSMUST00000127214 769 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm2343-201ENSMUST00000161177 1042 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm28141-201ENSMUST00000186676 342 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm28080-201ENSMUST00000188552 722 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm17981-201ENSMUST00000191109 739 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm28724-202ENSMUST00000194218 295 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm43176-201ENSMUST00000199653 2989 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm18327-201ENSMUST00000202426 830 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm4556-201ENSMUST00000217808 355 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm2436-201ENSMUST00000219562 774 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 CT030662.3-201ENSMUST00000228751 476 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 AC126549.1-201ENSMUST00000225044 3687 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Gm9408-201ENSMUST00000197375 1505 ntBASIC7.32□□□□□ -1.24
Trim47Q8C0E3 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim47Q8C0E3 Gm8853-201ENSMUST00000198366 1344 ntBASIC7.31□□□□□ -1.24
Trim47Q8C0E3 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim47Q8C0E3 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim47Q8C0E3 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim47Q8C0E3 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC7.31□□□□□ -1.24
Trim47Q8C0E3 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim47Q8C0E3 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim47Q8C0E3 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim47Q8C0E3 Gm26422-201ENSMUST00000104276 132 ntBASIC7.31□□□□□ -1.24
Trim47Q8C0E3 Gm24888-201ENSMUST00000104387 130 ntBASIC7.31□□□□□ -1.24
Trim47Q8C0E3 Gm3940-201ENSMUST00000105087 432 ntBASIC7.31□□□□□ -1.24
Trim47Q8C0E3 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
Trim47Q8C0E3 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms